DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020615
GeneTgfbr1
SynonymsAlk-5
ALK5
TbetaR-I
TbetaRI
Desc.transforming growth factor, beta receptor I
LocusNM_009370 chr4:47366177-47427796(+)
DB links


Entrez 21812
MGI 98728
Ensembl ENSMUSG00000007613
Vega OTTMUSG00000006800
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021225
(v2.0)
Tgfbr1NM_00937021812
13.71018.034066.1575120.277120.61896.78918.645773.2502617.42136.6548
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020615
(v1.0)
Tgfbr121812
Major ZGA0.99558
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021225
(v2.0)
Tgfbr121812
684/3830.3231401/383-0.049863/3830.9749232/3830.6048135/3830.5485783/3830.4313
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021225
(v2.0)
Tgfbr121812
376/1520.7898185/1520.166258/1522.125201/1521.717956/1520.6038302/1520.3889
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021225
(v2.0)
Tgfbr121812
37.563113627.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021225
(v2.0)
Tgfbr121812
5.35091025.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
8.347814.2363515.079414.26646.10895
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
31.294920.806757.084240.523518.0582
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
8.72845.013914.62195
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
8.519784.193812.41051
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
22.042912.6426
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
8.733474.945242.64377
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
13.961213.774812.0438
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
40.557430.7707
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020615
(v1.0)
Tgfbr1NM_00937021812
5.405873.2251
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020615
(v1.0)
Tgfbr1NM_00937021812
1.379771.76003
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020615
(v1.0)
10114H3091C12-3Mm.220941U004298NAP037442-1Tgfbr1;TC814936Q64729U,F,22.25862.65712.92722.72792.39792.54612.4747
0020615
(v1.0)
19551L0279D10-3Mm.197552Tgfbr121812
3.12813.03533.06613.01283.22093.13.1033
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020615
(v1.0)
1420893_a_atMm.197552Tgfbr1NM_009370.221812
0040.82500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020615
(v1.0)
A_52_P4538Tgfbr1NM_00937021812
11P0.4410.083P
Proteome N/A