DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020671
GeneThrap3
SynonymsTrap150
Desc.thyroid hormone receptor associated protein 3
LocusNM_146153 chr4:125841327-125879954(-)
DB links


Entrez 230753
MGI 2442637
Ensembl ENSMUSG00000043962
Vega OTTMUSG00000009350
Featureprotein-coding
GO(BP)
  •   8 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      transcription initiation from RNA polymerase II promoter (GO:0006367)
      intracellular steroid hormone receptor signaling pathway (GO:0030518)
      androgen receptor signaling pathway (GO:0030521)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021280
(v2.0)
Thrap3NM_146153230753
33.51721.842237.633949.458441.311962.258437.828939.802832.789259.3737
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020671
(v1.0)
Thrap3230753
2-Cell Transient0.89559
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021280
(v2.0)
Thrap3230753
696/3900.3221441/3900.061264/3902.9994789/3902.340426/390-1.81219/390-1.4256
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021280
(v2.0)
Thrap3230753
377/1540.7749192/1540.2008212/1543.9596536/1543.10998/154-2.077659/154-1.9563
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021280
(v2.0)
Thrap3230753
65.320517637.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021280
(v2.0)
Thrap3230753
22.692312917.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
22.704326.057436.797128.595426.7164
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
27.635328.645143.116345.728839.276
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
23.739412.257528.4292
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
23.17225.795729.5439
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
48.91743.4676
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
23.753212.089632.4028
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
34.068427.6122.7268
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
45.23922.6053
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020671
(v1.0)
Thrap3NM_146153230753
17.11544.66036
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020671
(v1.0)
Thrap3NM_146153230753
2.411534.44013
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020671
(v1.0)
12372H3142E04-3Mm.22440MGC37192230753
U025516NAP110718-1TC910100,TC910099Q91VL2U,F,22.75562.94283.22923.13282.81943.21493.1586
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020671
(v1.0)
1427408_a_atMm.236211Thrap3NM_146153.3230753
70.0593.82570.12550.9563.2
0020671
(v1.0)
1460545_atMm.236211Thrap3NM_146153.3230753
167.975179.325161.675165295.725
0020671
(v1.0)
1452125_atMm.236211Thrap3NM_146153.3230753
0076.575117.45133.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020671
(v1.0)
A_51_P269494Thrap3NM_146153230753
11P0.1440.0328P
0020671
(v1.0)
A_52_P79763Thrap3NM_146153230753
11P0.8650.387P
Proteome N/A