DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020681
GeneThumpd3
SynonymsGtrosa26as
Desc.THUMP domain containing 3
LocusNM_008188 chr6:112996321-113018267(+)
DB links


Entrez 14911
MGI 1277973
Ensembl ENSMUSG00000030264
Vega OTTMUSG00000023628
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021290
(v2.0)
Thumpd3NM_00818814911
16.422624.469113.659711.27059.646835.69715.45647.799778.222936.9404
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020681
(v1.0)
Thumpd314911
Maternal RNA0.97815
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021290
(v2.0)
Thumpd314911
592/3920.0817466/3920.133205/3922.6289455/3921.540240/392-1.2146303/392-0.9674
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021290
(v2.0)
Thumpd314911
315/1860.246241/1860.2563197/1863.6001443/1862.56727/186-2.513351/186-2.4316
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021290
(v2.0)
Thumpd314911
47.488911640.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021290
(v2.0)
Thumpd314911
18.96058622.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020681
(v1.0)
Thumpd3NM_00818814911
25.42559.450238.394046.6958610.9166
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020681
(v1.0)
Thumpd3FR265247,NM_00818814911
52.875421.849323.131319.065240.7037
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020681
(v1.0)
Thumpd3NM_00818814911
26.58476.0059210.3104
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020681
(v1.0)
Thumpd3NM_00818814911
25.94939.355345.78881
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020681
(v1.0)
Thumpd3FR265247,NM_00818814911
53.857861.4446
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020681
(v1.0)
Thumpd3NM_00818814911
26.60015.923666.34897
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020681
(v1.0)
Thumpd3NM_00818814911
7.771586.465125.6429
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020681
(v1.0)
Thumpd3FR265247,NM_00818814911
18.188120.4532
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020681
(v1.0)
Thumpd3NM_00818814911
10.64226.78513
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020681
(v1.0)
Thumpd3NM_00818814911
1.858991.07545
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020681
(v1.0)
2348C0313C05-3Mm.781Gt(ROSA)26asSor14911
U007261NAP100510-001Gt(ROSA)26asSor;GtROSA26asSor;TC865559,TC865558P97770U,F,22.69632.69322.82642.66772.86832.77192.8364
0020681
(v1.0)
19267L0263E03-3Mm.781Gt(ROSA)26asSor14911
U007261NAP015577-001Gt(ROSA)26asSor;GtROSA26asSor;TC842821P97770U,F,23.46963.42413.45583.543.78863.73643.7769
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020681
(v1.0)
1417684_atMm.781Thumpd3NM_008188.214911
519.125137.925132.525185.325470.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020681
(v1.0)
A_51_P232142Thumpd3NM_00818814911
11P0.7370.204P
Proteome N/A