DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020788
GeneTmc4
Synonyms
Desc.transmembrane channel-like gene family 4
LocusNM_181820 chr7:3617356-3629155(-)
DB links


Entrez 353499
MGI 2669035
Ensembl ENSMUSG00000019734
Vega OTTMUSG00000027890
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021401
(v2.0)
Tmc4NM_027203,NM_181820353499
23.315811.254713.774131.263513.27279.781913.461617.512616.100310.8551
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020788
(v1.0)
Tmc42-Cell Transient0.98322
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021401
(v2.0)
Tmc4353499
619/463-0.0937367/463-0.450367/4630.7963235/4630.351228/463-1.952178/463-1.9694
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021401
(v2.0)
Tmc4353499
261/207-0.1775159/207-0.49463/2071.8254215/2071.37538/207-2.494562/207-2.3108
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021401
(v2.0)
Tmc4353499
71.68668782.4
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021401
(v2.0)
Tmc4353499
37.73215173.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
11.7029.5572323.25829.181022.45813
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
97.524897.684672.087930.67665.37763
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
12.23558.5268210.4272
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
11.94319.4612713.0028
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
181.349279.846
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
12.24268.4100314.2611
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
21.53348.8646411.2104
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
21.091233.8347
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
2.8165718.2484
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020788
(v1.0)
Tmc4NM_027203,NM_181820353499
21.529117.1114
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020788
(v1.0)
1427178_atMm.360398Tmc4NM_181820.2353499
290.425270.425115.2500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020788
(v1.0)
A_51_P416408Tmc4NM_181820353499
11P0.6860.166P
0020788
(v1.0)
A_52_P137361Tmc4NM_181820353499
11P1.070.631P
Proteome N/A