DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020807
GeneTmed2
Synonymsp24beta1
Sid394
Desc.transmembrane emp24 domain trafficking protein 2
LocusNM_019770 chr5:124990800-125000512(+)
DB links


Entrez 56334
MGI 1929269
Ensembl ENSMUSG00000029390
Vega OTTMUSG00000024462
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021419
(v2.0)
Tmed2NM_01977056334
119.69261.092822.0876118.474177.19891.7106195.90412.6726122.06683.3489
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020807
(v1.0)
Tmed256334
MGA0.9329
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021419
(v2.0)
Tmed256334
592/3680.1726359/368-0.1515105/3681.7586301/3681.036355/368-0.6747372/368-0.5818
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021419
(v2.0)
Tmed256334
297/1550.423182/1550.114893/1552.7708250/1552.00356/155-2.449258/155-1.9896
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021419
(v2.0)
Tmed256334
55.43914837.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021419
(v2.0)
Tmed256334
21.40629722.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
63.488315.189288.1061122.448138.965
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
1.141990.221808208.254491.577118.78
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
66.382943.772616.5718
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
64.796315.03679.38902
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
0.2252550.218382
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
66.421543.173110.2976
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
81.5726118.22884.27
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
485.776379.587
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020807
(v1.0)
Tmed2NM_01977056334
18.27423.8725
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020807
(v1.0)
Tmed2NM_01977056334
56.289981.7683
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020807
(v1.0)
1431036_a_atMm.425279Tmed2NM_019770.256334
249.425398.5245.975297.2259.175
0020807
(v1.0)
1436451_a_atMm.425279Tmed2NM_019770.256334
998.1751332.05697.5251253.425980.55
0020807
(v1.0)
1455968_x_atMm.425279Tmed2NM_019770.256334
1265.951854.975917.951782.3751416.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020807
(v1.0)
A_51_P2989461110032D12RikNM_01977056334
11P0.6840.163P
0020807
(v1.0)
A_52_P4758251110032D12RikNM_01977056334
11P0.9610.771P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020807
(v1.0)
Tmed256334
1.333.3314.677.331