DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020980
GeneTmem30a
SynonymsCdc50a
D9Wsu20e
Desc.transmembrane protein 30A
LocusNM_133718 chr9:79616748-79641237(-)
DB links


Entrez 69981
MGI 106402
Ensembl ENSMUSG00000032328
Vega OTTMUSG00000027405
Featureprotein-coding
GO(BP)
  •   3 Terms
      neuron projection development (GO:0031175)
      protein localization to endosome (GO:0036010)
      positive regulation of protein exit from endoplasmic reticulum (GO:0070863)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021599
(v2.0)
Tmem30aNM_13371869981
28.01124.867026.111049.4891210.885221.012613.51923.3064710.629921.3885
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020980
(v1.0)
Tmem30a69981
MGA0.95828
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021599
(v2.0)
Tmem30a69981
776/3650.574644/3650.7014735/3654.56572736/3654.22833/365-1.3829219/365-1.3303
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021599
(v2.0)
Tmem30a69981
386/1341.0081299/1341.0362601/1345.64351852/1345.0948/134-1.882552/134-1.9343
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021599
(v2.0)
Tmem30a69981
44.881612934.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021599
(v2.0)
Tmem30a69981
17.489510017.49
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020980
(v1.0)
Tmem30aNM_13371869981
5.057894.186187.064317.558119.39226
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020980
(v1.0)
Tmem30aFR117110,NM_13371869981
7.866395.278519.251119.2261211.8442
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020980
(v1.0)
Tmem30aNM_13371869981
5.2884910.2444.56722
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020980
(v1.0)
Tmem30aNM_13371869981
5.162094.144152.44679
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020980
(v1.0)
Tmem30aFR117110,NM_13371869981
5.362253.33
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020980
(v1.0)
Tmem30aNM_13371869981
5.2915710.10372.68356
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020980
(v1.0)
Tmem30aNM_13371869981
6.540457.297667.30722
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020980
(v1.0)
Tmem30aFR117110,NM_13371869981
9.126289.71661
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020980
(v1.0)
Tmem30aNM_13371869981
6.424927.82497
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020980
(v1.0)
Tmem30aNM_13371869981
1.665487.73406
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020980
(v1.0)
3158C0611A09-3Mm.1712922010200I23Rik69981
U031129NAP031528-12010200I23Rik;TC852800U,F,22.76082.71972.92713.26523.10493.04443.1665
0020980
(v1.0)
5474H3001B04-3Mm.1712922010200I23Rik69981
U031129NAP095039-0012010200I23Rik;TC852800U,F,23.07963.0292.77042.8122.55542.6842.6502
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020980
(v1.0)
1416446_atMm.355034Tmem30aNM_133718.469981
76.797.72571.5169.95179
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020980
(v1.0)
Tmem30a69981
420540