DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021001
GeneTmem50a
SynonymsCAM
Smp1
Desc.transmembrane protein 50A
LocusNM_027935 chr4:134453764-134470831(-)
DB links


Entrez 71817
MGI 1919067
Ensembl ENSMUSG00000028822
Vega OTTMUSG00000011093
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021619
(v2.0)
Tmem50aNM_02793571817
80.267246.577818.45548.0197412.974122.597728.921818.471314.707630.9279
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021001
(v1.0)
Tmem50a71817
Maternal RNA0.9807
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021619
(v2.0)
Tmem50a71817
686/3930.2902469/3930.1385602/3934.17482334/3933.8929179/3930.9161939/3930.6559
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021619
(v2.0)
Tmem50a71817
413/1830.6586276/1830.4744437/1834.76751634/1834.471153/1831.7764762/1831.4536
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021619
(v2.0)
Tmem50a71817
66.578612951.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021619
(v2.0)
Tmem50a71817
25.81957534.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
48.417612.72775.978548.9816120.3696
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
60.813714.29266.7963710.550324.0324
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
50.62529.354513.8862
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
49.415112.599913.7137
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
14.515616.5752
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
50.654528.952515.0408
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
5.53528.6721110.1847
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
10.436512.4783
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021001
(v1.0)
Tmem50aNM_02793571817
67.00353.02346
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021001
(v1.0)
Tmem50aNM_02793571817
19.332375.991
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021001
(v1.0)
8107H3059H05-3Mm.28910Smp1-pending71817
U025652NAP008444-0013200001F09Rik;TC869189Q9CXL1U,F,23.34923.30543.19773.14262.73993.13732.8868
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021001
(v1.0)
1453155_atMm.88349Tmem50aNM_027935.271817
2109.2253043.975306.2608.8693.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021001
(v1.0)
A_51_P414160Tmem50aNM_02793571817
11P0.8040.273P
Proteome N/A