DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021088
GeneTmtc3
SynonymsmSmile
Desc.transmembrane and tetratricopeptide repeat containing 3
LocusNM_001110013 chr10:99906536-99949981(-)
NM_001033332 chr10:99910818-99949981(-)
DB links


Entrez 237500
MGI 3036255
Ensembl ENSMUSG00000036676
Vega OTTMUSG00000034150
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021706
(v2.0)
Tmtc3NM_001033332,NM_001110013237500
2.3148428.718115.523413.225816.83294.7578319.175910.417513.15364.76495
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021088
(v1.0)
Tmtc3237500
Maternal RNA0.96277
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021706
(v2.0)
Tmtc3237500
648/3610.3304490/3610.3238177/3612.5332385/3611.4179199/3611.1892826/3610.5934
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021706
(v2.0)
Tmtc3237500
309/1370.6568226/1370.6024169/1373.79359/1372.6988131/1371.961480/1371.2036
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021706
(v2.0)
Tmtc3237500
68.822913451.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021706
(v2.0)
Tmtc3237500
11.83887416
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
29.264610.699.3902611.532313.5319
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
79.563427.943121.252914.338421.5545
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
30.59880.84615911.663
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
29.867510.58267.72031
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
9.140226.50754
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
30.61660.834578.46737
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
8.6939111.13499.13457
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
8.957757.35777
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
25.803215.4136
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021088
(v1.0)
Tmtc3NM_001033332,NM_001110013237500
0.886444.04173
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021088
(v1.0)
1436826_atMm.296805Tmtc3NM_001110013.1,NM_001033332.2237500
663.725669.7285.225295.55432.525
0021088
(v1.0)
1440894_atMm.296805Tmtc3NM_001110013.1,NM_001033332.2237500
0371.35280.17500
0021088
(v1.0)
1457294_atMm.296805Tmtc3NM_001110013.1,NM_001033332.2237500
00114.85196.55213.625
Agilent44K N/A
Proteome N/A