DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021182
GeneTomm40
SynonymsTom40
Desc.translocase of outer mitochondrial membrane 40 homolog (yeast)
LocusNM_001109748 chr7:20286662-20300778(-)
NM_016871 chr7:20286662-20300778(-)
DB links


Entrez 53333
MGI 1858259
Ensembl ENSMUSG00000002984
Vega OTTMUSG00000038241
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Amyotrophic lateral sclerosis (ALS) (mmu05014)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021802
(v2.0)
Tomm40NM_001109748,NM_01687153333
31.849739.865325.784798.1174180.21674.135629.057231.4574127.7280.22
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021182
(v1.0)
Tomm4053333
MGA0.99458
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021802
(v2.0)
Tomm4053333
883/5660.1286437/566-0.4883389/5663.0331945/5662.065947/566-1.5125449/566-0.9311
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021802
(v2.0)
Tomm4053333
417/2210.4016220/221-0.1222373/2214.2829852/2213.26349/221-2.435180/221-2.0448
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021802
(v2.0)
Tomm4053333
65.864916639.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021802
(v2.0)
Tomm4053333
15.058911013.69
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
41.465117.94373.0532124.820.8127
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
542.245157.1951974.433136.08278.515
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
43.355511.647819.5762
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
42.319317.762923.3813
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
150.033105.506
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
43.380711.488325.6438
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
67.6359120.588.5886
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
456.449445.676
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021182
(v1.0)
Tomm40NM_001109748,NM_01687153333
5.601418.7614
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021182
(v1.0)
643C0124B02-3Mm.20843Tomm4053333
U028238NAP122257-001Tomm40;TC860092,TC853685,TC853681Q9QYA2U,F,23.09453.27413.72294.16263.82844.06423.9526
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021182
(v1.0)
1426118_a_atMm.440173Tomm40NM_001109748.1,NM_016871.253333
00117.175168.975243.575
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021182
(v1.0)
Tomm4053333
020020