DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021192
GeneTop2a
SynonymsDNA Topoisomerase II alpha
Top-2
Desc.topoisomerase (DNA) II alpha
LocusNM_011623 chr11:98854261-98885503(-)
DB links


Entrez 21973
MGI 98790
Ensembl ENSMUSG00000020914
Vega OTTMUSG00000006446
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021813
(v2.0)
Top2aNM_01162321973
3.2819225.554312.297353.356471.3503199.419154.15610.621468.3302200.75
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021192
(v1.0)
Top2a21973
MGA0.95685
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021813
(v2.0)
Top2a21973
595/3870.1075403/387-0.0576119/3871.8672330/3871.096473/387-0.3444584/387-0.0057
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021813
(v2.0)
Top2a21973
280/1510.3759185/1510.1757107/1513.006302/1512.312223/151-0.6349204/151-0.1642
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021813
(v2.0)
Top2a21973
55.417614837.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021813
(v2.0)
Top2a21973
15.8688917.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021192
(v1.0)
Top2aNM_01162321973
26.55018.4946139.707649.5157109.458
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021192
(v1.0)
Top2aNM_01162321973
415.93799.7276454.841580.7561824.38
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
27.76051.200239.2678
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
27.0978.409327.87097
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
153.021158.176
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
27.77671.183798.63261
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
36.76347.809347.2435
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
817.76785.839
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021192
(v1.0)
Top2aNM_01162321973
24.110640.985
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021192
(v1.0)
Top2aNM_01162321973
2.589033.7706
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021192
(v1.0)
3476C0667D09-3Mm.4237Top2a21973
U033378NAP035707-1Top2a;TC924722Q01320U,F,22.35212.40622.67612.6612.59472.73172.6637
0021192
(v1.0)
6883H3036F09-3Mm.4237Top2a21973
U033378NAP117250-1Top2a;TC924727,TC924725,TC924723,TC924721Q01320U,F,22.29922.61762.73552.7612.57073.03872.9149
0021192
(v1.0)
18941L0237F01-3Mm.4237Top2a21973
U033378NAP001569-002Top2a;TC924723,TC924720Q01320U,F,22.77553.153.63113.98823.35363.67523.6466
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021192
(v1.0)
1454694_a_atMm.4237Top2aNM_011623.221973
466.225345.751146.7251005.725942.3
0021192
(v1.0)
1442454_atMm.4237Top2aNM_011623.221973
00308.375413.3750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021192
(v1.0)
A_51_P252157Top2aNM_01162321973
11P0.3650.0676P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021192
(v1.0)
Top2a21973
010010