DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021197
GeneTopors
Synonyms
Descriptiontopoisomerase I binding, arginine/serine-rich
LocusNM_134097 UCSC: chr4:40206639-40216874(-) OLP: chr4:40206639-40216874(-)
DB links


Entrez 106021
MGI 2146189
Ensembl ENSMUSG00000036822
Vega OTTMUSG00000006555
Featureprotein-coding
GO_BP
  •   13 Terms
      ubiquitin-dependent protein catabolic process (GO:0006511)
      protein monoubiquitination (GO:0006513)
      apoptotic process (GO:0006915)
      response to DNA damage stimulus (GO:0006974)
      intrinsic apoptotic signaling pathway in response to DNA damage (GO:0008630)
      protein sumoylation (GO:0016925)
      protein localization to nucleus (GO:0034504)
      regulation of cell proliferation (GO:0042127)
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of ubiquitin-protein ligase activity (GO:0051443)
      maintenance of protein location in nucleus (GO:0051457)
      protein K48-linked ubiquitination (GO:0070936)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2021819 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021197
(v1.0)		ToporsNM_134097106021
37.328123.78149.087440.865615.3869
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021197
(v1.0)		ToporsNM_134097106021
39.034.8107325.9456
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021197
(v1.0)		ToporsNM_134097106021
38.097123.542219.7537
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021197
(v1.0)		ToporsNM_134097106021
39.05274.7448421.6651
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021197
(v1.0)		ToporsNM_134097106021
45.447339.457344.8071
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021197
(v1.0)		ToporsNM_134097106021
28.9818.2427
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021197
(v1.0)		ToporsNM_134097106021
7.6808310.5237
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021197
(v1.0)		1317C0198A05-3Mm.39006AW105885106021
U024955NAP097206-001AW105885;TC809813Q920L3U,F,23.05563.35043.42983.853.39463.65293.5695
0021197
(v1.0)		2480C0328E12-3Mm.39006AW105885106021
U024955NAP097206-001AW105885;TC809813Q920L3U,F,22.93122.92222.91352.92862.69342.99182.9575
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021197
(v1.0)		1448838_atMm.251548ToporsNM_134097.3106021
266.0750724.35292.3220.3
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0021197
(v1.0)		A_51_P267346ToporsNM_134097106021
11P0.4790.125P
0021197
(v1.0)		A_52_P188338ToporsNM_134097106021
11P0.7010.175P
Proteome N/A