DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021225
GeneTpm3
Synonymsgamma-TM
hTM30nm
hTMnm
skalphaTM.2
Tm5NM
Tpm-5
Tpm5
Trop-5
Descriptiontropomyosin 3, gamma
LocusNM_022314 UCSC: chr3:89876573-89904824(+) OLP: chr3:89876573-89904824(+)
NM_001253740 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001253738 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001271764 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
DB links


Entrez 59069
MGI 1890149
Ensembl ENSMUSG00000027940
Vega OTTMUSG00000029647
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2021849 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021225
(v1.0)		Tpm3NM_02231459069
18.087425.2244106.132117.44978.3707
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021225
(v1.0)		Tpm3NM_02231459069
18.91235.408527.5203
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021225
(v1.0)		Tpm3NM_02231459069
18.4624.971126.2881
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021225
(v1.0)		Tpm3NM_02231459069
18.92334.923628.8319
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021225
(v1.0)		Tpm3NM_02231459069
98.2617113.402108.01
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021225
(v1.0)		Tpm3NM_02231459069
36.763247.2289
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021225
(v1.0)		Tpm3NM_02231459069
9.2331612.8534
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021225
(v1.0)		6298H3022F07-3Tpm359069
2.94442.85593.04863.22673.1163.37953.5204
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021225
(v1.0)		1427260_a_atMm.240839Tpm3NM_022314.259069
447.875713.71378.571885.352635.68
0021225
(v1.0)		1436958_x_atMm.240839Tpm3NM_022314.259069
110.1176.75976.7751635.932527.3
0021225
(v1.0)		1427567_a_atMm.240839Tpm3NM_022314.259069
00115.275121.675223.85
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0021225
(v1.0)		A_52_P661033Tpm3NM_02231459069
11P0.4450.0781P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021225
(v1.0)		Tpm359069
420760