DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021249
GeneTra2b
SynonymsSfrs10
Silg41
TRA2beta
Desc.transformer 2 beta homolog (Drosophila)
LocusNM_009186 chr16:22245814-22266002(-)
DB links


Entrez 20462
MGI 106016
Ensembl ENSMUSG00000022858
Vega OTTMUSG00000035118
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021873
(v2.0)
Tra2bNM_00918620462
32.05230.152454.085186.527488.0874136.54151.691145.56780.76156.862
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021249
(v1.0)
Tra2b20462
Major ZGA0.95807
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021873
(v2.0)
Tra2b20462
703/4110.261500/4110.1662305/4113.1335935/4112.509844/411-1.1479336/411-0.887
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021873
(v2.0)
Tra2b20462
357/1820.457227/1820.2015285/1824.16774/1823.40176/182-2.675368/182-1.9958
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021873
(v2.0)
Tra2b20462
46.238616228.54
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021873
(v2.0)
Tra2b20462
18.799513114.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
31.333237.399664.454161.037536.6981
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
4.518114.7682212.319421.863311.4856
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
32.761711.721740.8038
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
31.978737.024133.808
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
86.2367322.18
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
32.780811.561237.0795
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
59.674558.934155.6749
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021249
(v1.0)
Tra2bFR115580,NM_00918620462
48.814439.4488
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021249
(v1.0)
Tra2bNM_00918620462
26.108856.9379
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021249
(v1.0)
Tra2bNM_00918620462
23.187345.1726
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021249
(v1.0)
17512K0636C05-3Mm.2984Silg4120462
3.83934.09313.43333.62633.68783.68013.6847
0021249
(v1.0)
19487L0275F02-3Mm.2984Silg4120462
U036910NAP092763-001TC874237Q64283U,F,23.75034.01364.34294.03043.68753.88023.6452
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021249
(v1.0)
1427432_a_atMm.210352Tra2bNM_009186.420462
882.6751299.7827.151486.951562.75
0021249
(v1.0)
1419543_a_atMm.210352Tra2bNM_009186.420462
316.1418.751652.9251154.3251033
0021249
(v1.0)
1441466_atMm.210352Tra2bNM_009186.420462
80.950173.1274184.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021249
(v1.0)
A_51_P264322Sfrs10NM_00918620462
11P0.5330.119P
Proteome N/A