DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021278
GeneTrappc3
SynonymsBet3
Desc.trafficking protein particle complex 3
LocusNM_013718 chr4:125939649-125953127(+)
DB links


Entrez 27096
MGI 1351486
Ensembl ENSMUSG00000028847
Vega OTTMUSG00000009355
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021904
(v2.0)
Trappc3NM_01371827096
52.737435.942642.3216.362528.703329.448229.803550.138433.356135.9946
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021278
(v1.0)
Trappc327096
Maternal RNA0.81658
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021904
(v2.0)
Trappc327096
713/506-0.018418/506-0.3909231/5062.4419605/5061.584372/506-0.7472399/506-0.9395
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021904
(v2.0)
Trappc327096
333/1960.2507179/196-0.2457181/1963.4075491/1962.640744/196-0.0954218/196-0.4432
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021904
(v2.0)
Trappc327096
60.2614840.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021904
(v2.0)
Trappc327096
27.03598332.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
37.368629.347912.172919.913821.2483
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
40.510438.011913.139123.930526.4067
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
39.072319.286632.0192
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
38.138529.053237.2092
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
70.50864.8482
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
39.09519.022440.8098
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
11.270319.227623.1846
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
42.393964.2391
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021278
(v1.0)
Trappc3NM_01371827096
26.304611.9471
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021278
(v1.0)
Trappc3NM_01371827096
3.875557.28088
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021278
(v1.0)
9079H3076B12-3Mm.8392Bet3-pending27096
U004822NAP098686-001TC941526O55013U,F,23.45293.16723.33863.2513.29213.32063.2043
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021278
(v1.0)
1416771_atMm.8392Trappc3NM_013718.227096
432.075410.05210.725357.425680.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021278
(v1.0)
A_51_P162176Trappc3NM_01371827096
11P1.3590.205P
0021278
(v1.0)
A_51_P432930Trappc3NM_01371827096
11P0.4960.117P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021278
(v1.0)
Trappc327096
012012