DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021282
GeneTrappc6b
Synonyms
Desc.trafficking protein particle complex 6B
LocusNM_030057 chr12:60144079-60162448(-)
DB links


Entrez 78232
MGI 1925482
Ensembl ENSMUSG00000020993
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021909
(v2.0)
Trappc6bNM_03005778232
26.630734.748120.706212.298619.533917.45310.988722.629317.288319.2412
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021282
(v1.0)
Trappc6b78232
Maternal RNA0.92784
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021909
(v2.0)
Trappc6b78232
499/366-0.0654325/366-0.2867101/3661.7107266/3660.866441/366-1.0819218/366-1.3408
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021909
(v2.0)
Trappc6b78232
227/1530.056143/153-0.212285/1532.6598231/1531.908312/153-1.537967/153-1.7678
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021909
(v2.0)
Trappc6b78232
65.272213149.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021909
(v2.0)
Trappc6b78232
22.76657132.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021282
(v1.0)
Trappc6bNM_03005778232
36.103814.2339.1602813.52067.74344
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021282
(v1.0)
Trappc6bFR063839,FR257965,NM_03005778232
109.87528.632292.400453.892416.7864
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021282
(v1.0)
Trappc6bNM_03005778232
37.74989.7391115.5285
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021282
(v1.0)
Trappc6bNM_03005778232
36.847514.090116.7425
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021282
(v1.0)
Trappc6bFR063839,FR257965,NM_03005778232
10.17413.2679
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021282
(v1.0)
Trappc6bNM_03005778232
37.77179.6057218.3626
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021282
(v1.0)
Trappc6bNM_03005778232
8.4809913.054711.8559
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021282
(v1.0)
Trappc6bFR063839,FR257965,NM_03005778232
9.612739.97096
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021282
(v1.0)
Trappc6bNM_03005778232
32.897648.4327
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021282
(v1.0)
Trappc6bNM_03005778232
7.4600613.4465
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021282
(v1.0)
1428177_atMm.290070Trappc6bNM_030057.278232
1940.72502395.52500
0021282
(v1.0)
1428178_s_atMm.290070Trappc6bNM_030057.278232
2143.275817.4251114.1976.2751390.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021282
(v1.0)
A_52_P644674Trappc6bNM_03005778232
11P1.0960.542P
Proteome N/A