DBTMEE:0021313
| Gene | Trim13 |
| Synonyms | LEU5
Rfp2
RNF77 |
| Description | tripartite motif-containing 13 |
| Locus | NM_001164220 UCSC: chr14:62217063-62224782(+) OLP: chr14:62217063-62224782(+)
NM_023233 UCSC: chr14:62218349-62224782(+) OLP: chr14:62218349-62224782(+)
|
| DB links |
Entrez 66597
MGI 1913847
Ensembl ENSMUSG00000035235
|
| Feature | protein-coding |
| GO_BP |
-
 7 Terms
signal transduction (GO:0007165)
positive regulation of cell death (GO:0010942)
positive regulation of macroautophagy (GO:0016239)
ER-associated protein catabolic process (GO:0030433)
positive regulation of I-kappaB kinase/NF-kappaB cascade (GO:0043123)
proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
protein autoubiquitination (GO:0051865)
|
| GO_MF |
-
5 Terms
|
| GO_CC |
-
7 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2021940 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 250.039 | 159.806 | 27.266 | 29.8914 | 5.68468 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 261.439 | 1.30074 | 174.352 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 255.19 | 158.201 | 137.676 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 261.591 | 1.28292 | 150.999 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 25.2441 | 28.8614 | 30.7521 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 84.9671 | 30.5554 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0021313
(v1.0) | Trim13 | NM_001164220,NM_023233 | 66597
| 121.027 | 99.6869 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0021313
(v1.0) | 13399 | J0033B02-3 | Mm.23959 | Trim13 | 66597
| U015729 | NAP095526-001 | Trim13; | TC815806 | Q9CYB0 | U,F,2 | 3.7409 | 3.7767 | 3.4088 | 3.5882 | 3.2549 | 3.3317 | 3.3582 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0021313
(v1.0) | 1417888_at | Mm.23959 | Trim13 | NM_001164220.1,NM_023233.3 | 66597
| 1761.93 | 1572.85 | 749.1 | 315.175 | 272.55 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0021313
(v1.0) | A_51_P114714 | Trim13 | NM_023233 | 66597
| 1 | 1 | P | 0.756 | 0.218 | P |
0021313
(v1.0) | A_52_P17788 | Trim13 | NM_023233 | 66597
| 1 | 1 | P | 1.14 | 0.474 | P |
|
| Proteome |
N/A |
