DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021320
GeneTrim23
SynonymsArfd1
Desc.tripartite motif-containing 23
LocusNM_030731 chr13:104969178-104992128(+)
DB links


Entrez 81003
MGI 1933161
Ensembl ENSMUSG00000021712
Vega OTTMUSG00000035058
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021947
(v2.0)
Trim23NM_03073181003
2.385614.510557.149028.048317.342085.327747.317674.276566.747363.36046
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021320
(v1.0)
Trim2381003
MGA0.94816
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021947
(v2.0)
Trim2381003
582/3550.1999409/3550.0878144/3552.2608365/3551.36515/355-3.845773/355-2.8556
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021947
(v2.0)
Trim2381003
308/1720.326201/1720.108141/1723.2262351/1722.34350/172-5.40333/172-2.9248
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021947
(v2.0)
Trim2381003
48.821812539.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021947
(v2.0)
Trim2381003
12.27478514.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021320
(v1.0)
Trim23NM_03073181003
4.686944.92415.989825.088755.10573
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021320
(v1.0)
Trim23NM_03073181003
102.60475.1759118.68594.421741.1705
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
4.900620.8724445.3723
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
4.783494.874663.16638
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
47.480319.2998
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
4.903470.8604943.47277
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
5.545644.913394.66969
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
41.53734.9591
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021320
(v1.0)
Trim23NM_03073181003
3.830443.2546
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021320
(v1.0)
Trim23NM_03073181003
0.361430.785913
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021320
(v1.0)
10562H3099E03-3Mm.555776330516O20Rik76175
U040786NAP092463-001Trim23;TC814837Q99PN1U,F3.29113.55683.88563.65273.12463.31353.2281
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021320
(v1.0)
1426969_atMm.244190Trim23NM_030731.381003
30.17535.274.77519.52524.75
0021320
(v1.0)
1456089_atMm.244190Trim23NM_030731.381003
77.479.42593.2250130.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021320
(v1.0)
A_52_P459238Trim23AK08892281003
11P1.0420.786P
Proteome N/A