DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021359
GeneTrim6
SynonymsD7Ertd684e
Desc.tripartite motif-containing 6
LocusNM_001013616 chr7:111367309-111383666(+)
DB links


Entrez 94088
MGI 2137352
Ensembl ENSMUSG00000072244
Vega OTTMUSG00000019051
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021986
(v2.0)
Trim6NM_00101361694088
0.3027045.519375.2080828.500243.273833.24230.2051713.019127.970931.3936
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021359
(v1.0)
Trim694088
MGA0.98948
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021986
(v2.0)
Trim694088
510/361-0.0143363/361-0.107941/3610.4498138/361-0.0557172/3610.98845/3610.6262
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021986
(v2.0)
Trim694088
226/176-0.1512149/176-0.354237/1761.2934123/1760.8056118/1761.4594529/1760.9843
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021986
(v2.0)
Trim694088
63.59111057.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021986
(v2.0)
Trim694088
17.266128.3
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021359
(v1.0)
Trim6NM_00101361694088
5.737483.5938921.208929.90740.150502
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021359
(v1.0)
Trim6FR321365,NM_00101361694088
15.05998.8576451.68185.64570.395304
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021359
(v1.0)
Trim6NM_00101361694088
5.999070.1107023.92102
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021359
(v1.0)
Trim6NM_00101361694088
5.855683.557812.232
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021359
(v1.0)
Trim6FR321365,NM_00101361694088
16.01987.15112
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021359
(v1.0)
Trim6NM_00101361694088
6.002550.1091862.44798
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021359
(v1.0)
Trim6NM_00101361694088
19.636128.876819.3162
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021359
(v1.0)
Trim6FR321365,NM_00101361694088
87.560749.832
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021359
(v1.0)
Trim6NM_00101361694088
0.2422149.76058
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021359
(v1.0)
Trim6NM_00101361694088
0.83770.104331
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021359
(v1.0)
6433H3025A12-3Mm.128106U008537NAP001035-002Trim6;TC843690Q99PQ6U,F,22.44652.43232.56323.02732.91542.96533.003
0021359
(v1.0)
9781H3086C10-3U008537NAP001035-002Trim6;TC843690Q99PQ6U,F,22.99112.80452.80193.33313.16073.13733.1366
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021359
(v1.0)
1424448_atMm.274843Trim6NM_001013616.294088
0069.45194.475187.575
0021359
(v1.0)
1453624_atMm.274843Trim6NM_001013616.294088
0000305.525
Agilent44K N/A
Proteome N/A