DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021393
GeneTrmt13
SynonymsCcdc76
Desc.tRNA methyltransferase 13
LocusNM_030016 chr3:116284254-116317505(-)
DB links


Entrez 229780
MGI 1925219
Ensembl ENSMUSG00000033439
Vega OTTMUSG00000022737
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022021
(v2.0)
Trmt13NM_030016229780
0.9446188.3724317.51334.306598.593923.117431.8368613.1967.659882.52324
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021393
(v1.0)
Ccdc76229780
1-Cell Transient0.95649
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022021
(v2.0)
Trmt13229780
527/429-0.2155367/429-0.340513/429-1.376732/429-2.377614/429-2.794189/429-2.8475
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022021
(v2.0)
Trmt13229780
246/210-0.2831125/210-0.859111/210-0.609321/210-1.94076/210-2.877449/210-2.6618
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021393
(v1.0)
Ccdc76NM_030016229780
8.700612.1823.203215.963041.28393
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021393
(v1.0)
Ccdc76FR195532,NM_030016229780
315.655175.19971.7259139.63631.0355
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021393
(v1.0)
Ccdc76NM_030016229780
9.097270.34545713.2908
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021393
(v1.0)
Ccdc76NM_030016229780
8.8798412.05979.77256
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021393
(v1.0)
Ccdc76FR195532,NM_030016229780
71.81976.6563
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021393
(v1.0)
Ccdc76NM_030016229780
9.102560.34072510.7182
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021393
(v1.0)
Ccdc76NM_030016229780
2.965675.757565.3234
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021393
(v1.0)
Ccdc76FR195532,NM_030016229780
12.48189.40248
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021393
(v1.0)
Ccdc76NM_030016229780
7.282164.06211
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021393
(v1.0)
Ccdc76NM_030016229780
5.241065.40849
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021393
(v1.0)
1437362_atMm.259648Ccdc76NM_030016.2229780
283.95362.80341.575218.875
Agilent44K N/A
Proteome N/A