DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021403
GeneTrnau1ap
SynonymsSECp43
Trspap1
Desc.tRNA selenocysteine 1 associated protein 1
LocusNM_027925 chr4:131867678-131885453(-)
DB links


Entrez 71787
MGI 1919037
Ensembl ENSMUSG00000028898
Vega OTTMUSG00000009574
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022031
(v2.0)
Trnau1apNM_02792571787
11.61483.7622710.84385.268026.5458918.19854.8638110.69237.3379420.6654
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021403
(v1.0)
Trnau1ap71787
1-Cell Transient0.92535
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022031
(v2.0)
Trnau1ap71787
655/522-0.185414/522-0.449681/5220.8976233/5220.166818/522-2.7337137/522-2.5161
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022031
(v2.0)
Trnau1ap71787
238/197-0.2387155/197-0.459471/1972.0627198/1971.327510/197-2.13556/197-2.3828
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022031
(v2.0)
Trnau1ap71787
77.393613059.53
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022031
(v2.0)
Trnau1ap71787
15.26746523.49
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021403
(v1.0)
Trnau1apNM_02792571787
3.911897.550193.921754.544273.39213
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021403
(v1.0)
Trnau1apFR168445,NM_02792571787
13.922514.18459.5971515.331710.28
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021403
(v1.0)
Trnau1apNM_02792571787
4.090244.247668.23742
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021403
(v1.0)
Trnau1apNM_02792571787
3.992477.474387.91649
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021403
(v1.0)
Trnau1apFR168445,NM_02792571787
38.870288.8261
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021403
(v1.0)
Trnau1apNM_02792571787
4.092614.189488.68254
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021403
(v1.0)
Trnau1apNM_02792571787
3.630934.387675.04076
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021403
(v1.0)
Trnau1apFR168445,NM_02792571787
41.116638.5394
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021403
(v1.0)
Trnau1apNM_02792571787
4.494986.84963
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021403
(v1.0)
Trnau1apNM_02792571787
37.021739.0197
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021403
(v1.0)
20121L0522F02-3Mm.344511110007F05Rik71787
U025595NAP007923-0011110007F05Rik;TC859278,TC859275,TC859274Q9D1I0U,F,23.83963.92933.44653.67233.14783.30893.1867
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021403
(v1.0)
1428746_a_atMm.239183Trnau1apNM_027925.371787
301.2603.9422.575459.025427.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021403
(v1.0)
A_51_P4758911110007F05RikNM_02792571787
11P0.6750.158P
0021403
(v1.0)
A_52_P1932331110007F05RikNM_02792571787
11P0.4770.1P
Proteome N/A