DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021462
GeneTsen54
Synonyms
Desc.tRNA splicing endonuclease 54 homolog (S. cerevisiae)
LocusNM_029557 chr11:115676053-115684416(+)
DB links


Entrez 76265
MGI 1923515
Ensembl ENSMUSG00000020781
Vega OTTMUSG00000003539
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022092
(v2.0)
Tsen54NM_02955776265
3.5511910.75434.8701729.532931.012314.430210.55525.374530.866617.8742
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021462
(v1.0)
Tsen5476265
Major ZGA0.98621
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022092
(v2.0)
Tsen5476265
986/4960.4776475/496-0.1782735/4964.13561677/4963.082368/496-0.7999611/496-0.2979
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022092
(v2.0)
Tsen5476265
571/2060.9546264/2060.2406700/2065.28531527/2064.204749/206-0.0137383/2060.2941
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022092
(v2.0)
Tsen5476265
117.693922053.5
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022092
(v2.0)
Tsen5476265
19.593411716.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
11.18143.3962722.004921.49767.52384
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
37.742714.24297.4884112.3339.2813
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
11.69121.298713.7054
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
11.41173.362173.98181
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
43.50879.26864
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
11.69791.280924.36711
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
20.373120.756821.436
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
46.10556.9654
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021462
(v1.0)
Tsen54NM_02955776265
0.2576814.16554
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021462
(v1.0)
Tsen54NM_02955776265
0.05916610
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021462
(v1.0)
A_51_P434953Tsen54AK00275876265
11P0.1520.0337P
Proteome N/A