DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021547
GeneTtc3
SynonymsD16Ium21
D16Ium21e
TPRD
Desc.tetratricopeptide repeat domain 3
LocusNM_009441 chr16:94592346-94690828(+)
DB links


Entrez 22129
MGI 1276539
Ensembl ENSMUSG00000040785
Vega OTTMUSG00000030295
Featureprotein-coding
GO(BP)
  •   4 Terms
      ubiquitin-dependent protein catabolic process (GO:0006511)
      negative regulation of cell morphogenesis involved in differentiation (GO:0010771)
      negative regulation of neuron differentiation (GO:0045665)
      protein K48-linked ubiquitination (GO:0070936)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022178
(v2.0)
Ttc3NM_00944122129
8.451714.5265813.232116.143912.947412.72335.437711.43914.033111.4105
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021547
(v1.0)
Ttc322129
2-Cell Transient0.76449
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022178
(v2.0)
Ttc322129
677/3570.4094466/3570.2675164/3572.4394354/3571.31339/357-1.1168198/357-1.4428
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022178
(v2.0)
Ttc322129
382/1580.7571199/1580.2154160/1583.5215340/1582.418317/158-1.113683/158-1.5111
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022178
(v2.0)
Ttc322129
40.84215027.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022178
(v2.0)
Ttc322129
8.01211156.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021547
(v1.0)
Ttc3NM_00944122129
4.70369.1568912.02198.978824.8167
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021547
(v1.0)
Ttc3FR023873,FR044051,FR149381,NM_00944122129
81.1515101.277190.676212.492344.237
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021547
(v1.0)
Ttc3NM_00944122129
4.918053.090889.99037
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021547
(v1.0)
Ttc3NM_00944122129
4.80059.064958.45577
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021547
(v1.0)
Ttc3FR023873,FR044051,FR149381,NM_00944122129
330.493203.99
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021547
(v1.0)
Ttc3NM_00944122129
4.920913.048549.274
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021547
(v1.0)
Ttc3NM_00944122129
11.13048.669399.69953
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021547
(v1.0)
Ttc3FR023873,FR044051,FR149381,NM_00944122129
191.021180.384
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021547
(v1.0)
Ttc3NM_00944122129
3.30415.75156
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021547
(v1.0)
Ttc3NM_00944122129
1.668113.98359
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021547
(v1.0)
11708H3121G11-3Mm.3679Ttc322129
U,F,22.62912.83482.8392.68212.27052.44332.5086
0021547
(v1.0)
16032K0322C08-3Mm.3679Ttc322129
TC927128,TC924570,TC924563U,F,22.76472.96882.60942.74572.45392.48442.6117
0021547
(v1.0)
21185L0838E04-3Mm.213408Ttc322129
TC927128,TC927127,TC927126,TC924573,TC924570,TC924563U,F,22.46752.56162.00432.33912.59522.49722.5007
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021547
(v1.0)
1447908_x_atMm.213408Ttc3NM_009441.222129
2448.52976.7753376.7753752.2253922.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021547
(v1.0)
A_51_P137947Ttc3NM_00944122129
11P0.4390.103P
Proteome N/A