DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021610
GeneTubb4b
SynonymsTubb2c
Desc.tubulin, beta 4B class IVB
LocusNM_146116 chr2:25077678-25080222(-)
DB links


Entrez 227613
MGI 1915472
Ensembl ENSMUSG00000036752
Vega OTTMUSG00000011806
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022241
(v2.0)
Tubb4bNM_146116227613
294.7021675.41325.559192.801196.268292.03874.221363.278133.852426.771
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021610
(v1.0)
Tubb2c227613
Maternal RNA0.99898
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022241
(v2.0)
Tubb4b227613
589/480-0.2171367/480-0.5022449/4803.47191450/4802.919734/480-1.7323251/480-1.529
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022241
(v2.0)
Tubb4b227613
255/1730.0466141/173-0.4085254/1734.063715/1733.359612/173-1.710760/173-2.0994
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
1742.06225.158143.646135.97752.8958
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
467.69548.173428.870130.242410.2002
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
1821.49107.775245.652
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
1777.95222.897270.187
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
96.586290.7475
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
1822.54106.299296.332
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
132.993131.29193.2437
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
29.915622.2171
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021610
(v1.0)
Tubb2cNM_146116227613
680.117208.569
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021610
(v1.0)
Tubb2cNM_146116227613
140.08937.8806
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021610
(v1.0)
6389H3024D01-3MGC28623227613
U025912NAP093014-001TC940018Q99JZ6U,F,23.52263.59793.77364.10522.90953.35313.2488
0021610
(v1.0)
21751L0908B12-3MGC28623227613
U002857NAP001745-001Ptpn1;TC920257P358213.32823.2783.74323.96663.99533.77833.7796
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021610
(v1.0)
1423642_atMm.227260Tubb2cNM_146116.2227613
3065.9751627.551774.151571.2251311.125
0021610
(v1.0)
1456078_x_atMm.227260Tubb2cNM_146116.2227613
451.975425.55309.4109.459.05
0021610
(v1.0)
1438622_x_atMm.227260Tubb2cNM_146116.2227613
121.8108.8000
0021610
(v1.0)
1456470_x_atMm.227260Tubb2cNM_146116.2227613
381.7250232.175331.750
0021610
(v1.0)
1439416_x_atMm.227260Tubb2cNM_146116.2227613
00043.9750
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021610
(v1.0)
Tubb2c227613
404123328948186