DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021612
GeneTubb6
Synonyms
Desc.tubulin, beta 6 class V
LocusNM_026473 chr18:67550385-67562403(+)
DB links


Entrez 67951
MGI 1915201
Ensembl ENSMUSG00000001473
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022243
(v2.0)
Tubb6NM_02647367951
66.0647294.32595.459817.595714.607577.2223170.671179.28924.031395.2141
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021612
(v1.0)
Tubb667951
Maternal RNA0.98606
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022243
(v2.0)
Tubb667951
925/4780.4388498/478-0.0569114/4781.5095432/4781.1811347/4781.58741927/4781.41
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022243
(v2.0)
Tubb667951
513/2230.6866247/2230.0311105/2232.4516378/2232.0803193/2231.83011057/2231.6411
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022243
(v2.0)
Tubb667951
66.509115542.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022243
(v2.0)
Tubb667951
16.46999816.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
306.01266.271713.122810.1587122.969
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
360.88269.755114.522811.3051138.725
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
319.96424.160572.3039
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
312.31665.6063132.966
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
90.7514192.869
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
320.1523.8296145.832
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
12.14979.8086116.8282
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
15.593349.9552
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021612
(v1.0)
Tubb6NM_02647367951
643.71751.0636
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021612
(v1.0)
Tubb6NM_02647367951
34.094120.2899
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021612
(v1.0)
1151C0181E01-3Mm.1818602310057H16Rik67951
U018843NAP095638-0012310057H16Rik;TC892184,TC892183Q922F43.71273.71043.40293.59453.35573.23563.34
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021612
(v1.0)
1416431_atMm.181860Tubb6NM_026473.267951
1108.9514.975177.5500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021612
(v1.0)
A_51_P421140Tubb6NM_02647367951
11P0.9510.703P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021612
(v1.0)
Tubb667951
303119179518100