DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021634
GeneTwf1
SynonymsA6
actin monomer-binding protein
Ptk9
twinfilin
Twinfilin-1
Desc.twinfilin, actin-binding protein, homolog 1 (Drosophila)
LocusNM_008971 chr15:94408379-94420255(-)
DB links


Entrez 19230
MGI 1100520
Ensembl ENSMUSG00000022451
Vega OTTMUSG00000017538
Featureprotein-coding
GO(BP)
  •   5 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022268
(v2.0)
Twf1NM_00897119230
29.557115.643621.889927.188438.952733.626279.185215.567832.755330.735
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021634
(v1.0)
Twf119230
MGA0.95716
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022268
(v2.0)
Twf119230
617/3500.3043410/3500.1118182/3502.6164478/3501.773677/350-0.1251459/350-0.2076
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022268
(v2.0)
Twf119230
319/1690.4016201/1690.1332174/1693.5514454/1692.738818/169-1.1303111/169-1.1948
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022268
(v2.0)
Twf119230
73.539814052.53
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022268
(v2.0)
Twf119230
23.73648826.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021634
(v1.0)
Twf1NM_00897119230
16.257315.135120.243826.97856.0046
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021634
(v1.0)
Twf1FR363114,NM_00897119230
59.836518.791613.515827.462983.4959
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021634
(v1.0)
Twf1NM_00897119230
16.998510.809316.5127
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021634
(v1.0)
Twf1NM_00897119230
16.592214.983111.5165
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021634
(v1.0)
Twf1FR363114,NM_00897119230
8.994777.89373
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021634
(v1.0)
Twf1NM_00897119230
17.008410.661312.6309
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021634
(v1.0)
Twf1NM_00897119230
18.742626.048422.59
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021634
(v1.0)
Twf1FR363114,NM_00897119230
30.527616.4404
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021634
(v1.0)
Twf1NM_00897119230
8.6330518.0056
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021634
(v1.0)
Twf1NM_00897119230
11.677110.6657
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021634
(v1.0)
1525C0222H07-3Mm.38233Ptk919230
U036577NAP097659-001Ptk9;TC814601Q91YR1U,F,23.88063.97613.40413.75633.21393.58973.76
0021634
(v1.0)
6149H3018H04-3Mm.38233Ptk919230
Ptk92.64092.70362.65622.81512.6662.68152.7752
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021634
(v1.0)
1420873_atMm.309867Twf1NM_008971.419230
86.3028.425034.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021634
(v1.0)
A_52_P484405Ptk9NM_00897119230
11P0.9670.794P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021634
(v1.0)
Twf119230
300300