DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021652
GeneTxndc5
SynonymsERp46
PC-TRP
Desc.thioredoxin domain containing 5
LocusNM_145367 chr13:38592144-38620329(-)
DB links


Entrez 105245
MGI 2145316
Ensembl ENSMUSG00000038991
Vega OTTMUSG00000035033
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022286
(v2.0)
Txndc5NM_001289598,NM_001289599,NM_145367105245
53.9036113.06947.70267.623785.6231845.77187.04552.058411.788252.0134
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021652
(v1.0)
Txndc5105245
Maternal RNA0.90063
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022286
(v2.0)
Txndc5105245
807/5200.121542/520-0.0563171/5201.9717554/5201.4183300/5201.25751462/5200.8907
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022286
(v2.0)
Txndc5105245
450/2560.2999314/2560.1778161/2562.8741504/2562.2973226/2561.8611982/2561.3368
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022286
(v2.0)
Txndc5105245
77.402714453.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022286
(v2.0)
Txndc5105245
24.11858927.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
114.91630.60685.45453.770661.4573
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
813.889188.34344.414736.6887573.341
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
120.15519.911533.3927
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
117.28330.299536.0776
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
150.936239.242
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
120.22519.638839.5687
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
5.050023.640678.2254
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
14.522945.8329
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021652
(v1.0)
Txndc5NM_145367105245
31.15450.547728
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021652
(v1.0)
Txndc5NM_145367105245
59.708896.3396
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021652
(v1.0)
13243J0008D06-3Mm.28622AL022641105245
U034699NAP095606-001AL022641;TC903786Q91W90U,F,23.96233.94574.34064.07053.6243.9723.7081
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021652
(v1.0)
1451091_atMm.28622Txndc5NM_145367.3105245
1059.25777.500169.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021652
(v1.0)
A_51_P483373Txndc5NM_145367105245
11P1.540.145P
0021652
(v1.0)
A_52_P535561Txndc5NM_145367105245
11P0.6450.146P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021652
(v1.0)
Txndc5105245
8138173924