DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021671
GeneTyw1
SynonymsRsafd1
Desc.tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
LocusNM_178897 chr5:130731489-130761256(+)
NM_001015876 chr5:130732907-130817437(+)
DB links


Entrez 100929
MGI 2141161
Ensembl ENSMUSG00000056310
Vega OTTMUSG00000027917
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022305
(v2.0)
Tyw1NM_001015876,NM_178897100929
6.02092131.87992.787315.62111.68574.5180915.5927108.818.25633.88783
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021671
(v1.0)
Tyw1100929
Maternal RNA0.98275
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022305
(v2.0)
Tyw1100929
501/357-0.0239343/357-0.1734231/3572.931648/3572.18346/357-3.631469/357-2.9433
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022305
(v2.0)
Tyw1100929
240/1450.2128167/1450.087185/1453.8444477/1453.02741/145-4.16333/145-2.68
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022305
(v2.0)
Tyw1100929
62.225116737.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022305
(v2.0)
Tyw1100929
7.4632997.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
137.10264.494811.62228.1294711.1046
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021671
(v1.0)
Tyw1FR314471,NM_001015876,NM_178897100929
138.22461.207411.92988.7513711.7472
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
143.3522.2019170.3653
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
139.92663.847380.7087
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021671
(v1.0)
Tyw1FR314471,NM_001015876,NM_178897100929
62.143485.7393
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
143.4362.1717588.5186
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
10.76037.8493312.7065
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021671
(v1.0)
Tyw1FR314471,NM_001015876,NM_178897100929
8.6566413.2016
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
51.97144.41487
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021671
(v1.0)
Tyw1NM_001015876,NM_178897100929
2.714451.60412
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021671
(v1.0)
1426781_atMm.271296Tyw1NM_178897.4,NM_001015876.2100929
218.75159.275145.725045.85
0021671
(v1.0)
1446070_atMm.271296Tyw1NM_178897.4,NM_001015876.2100929
361.875411.875376.675369.025425.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021671
(v1.0)
A_51_P472588Rsafd1NM_001015876100929
11P1.0630.651P
Proteome N/A