DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021687
GeneUba52
SynonymsD8Ertd21e
Desc.ubiquitin A-52 residue ribosomal protein fusion product 1
LocusNM_019883 chr8:73032165-73034266(-)
DB links


Entrez 22186
MGI 98887
Ensembl ENSMUSG00000090137
Vega OTTMUSG00000033543
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022321
(v2.0)
Uba52NM_01988322186
3967.7470.680112.2327388.838644.4256363.63311.37220.8502776.3486964.79
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021687
(v1.0)
Uba5222186
Major ZGA0.99546
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022321
(v2.0)
Uba5222186
830/5040.2065424/504-0.3647900/5044.40482502/5043.636314/504-3.0245128/504-2.5625
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022321
(v2.0)
Uba5222186
357/2130.2313170/213-0.4391605/2135.02961606/2134.22984/213-3.382957/213-2.4701
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022321
(v2.0)
Uba5222186
60.968218532.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022321
(v2.0)
Uba5222186
27.718310326.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021687
(v1.0)
Uba52NM_01988322186
73.46718.4587289.883448.33223.063
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021687
(v1.0)
Uba52FR151411,FR157307,FR358035,FR431681,NM_01988322186
1.944080254.647292.4240.970548
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021687
(v1.0)
Uba52NM_01988322186
76.81661451.049.22862
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021687
(v1.0)
Uba52NM_01988322186
74.98068.3737615.441
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021687
(v1.0)
Uba52NM_01988322186
76.86121431.1716.9352
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021687
(v1.0)
Uba52NM_01988322186
268.387432.881539.101
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021687
(v1.0)
Uba52FR151411,FR157307,FR358035,FR431681,NM_01988322186
360.966296.419
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021687
(v1.0)
Uba52NM_01988322186
28.6838427.02
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021687
(v1.0)
Uba52NM_01988322186
3.590333.70503
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021687
(v1.0)
6519H3026E08-5Uba5222186
U024811NAP092508-001TC903024,TC903022,TC903021,TC903020,TC903016,TC903015,TC903014,TC903012,TC903006,TC903001,TC903000,TC877182P02248U,F,23.84793.52164.43285.11775.18415.21865.1059
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021687
(v1.0)
1416624_a_atMm.297372Uba52NM_019883.322186
3448.95289.9754412.42513195.18597.025
0021687
(v1.0)
1452701_x_atMm.297372Uba52NM_019883.322186
647.12501463.4254040.952797.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021687
(v1.0)
A_51_P334570Uba52NM_01988322186
11P1.1490.396P
0021687
(v1.0)
A_51_P334571Uba52NM_01988322186
11P1.1720.357P
0021687
(v1.0)
A_52_P475889Uba52NM_01988322186
11P0.9950.968P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021687
(v1.0)
Uba5222186
332312318300732