DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021690
GeneUbac1
SynonymsUbadc1
Desc.ubiquitin associated domain containing 1
LocusNM_133835 chr2:25852478-25877280(-)
DB links


Entrez 98766
MGI 1920995
Ensembl ENSMUSG00000036352
Vega OTTMUSG00000012658
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022324
(v2.0)
Ubac1NM_13383598766
6.3576527.556525.26079.427095.6149913.63948.4436229.09046.4753116.668
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021690
(v1.0)
Ubac198766
Maternal RNA0.98187
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022324
(v2.0)
Ubac198766
682/574-0.2636418/574-0.572574/5740.6348163/574-0.482465/574-1.0732475/574-0.8704
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022324
(v2.0)
Ubac198766
301/230-0.1241157/230-0.663464/2301.7038146/2300.66988/230-2.643767/230-2.3528
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022324
(v2.0)
Ubac198766
59.872712049.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022324
(v2.0)
Ubac198766
16.02947321.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021690
(v1.0)
Ubac1NM_13383598766
28.642117.55077.021233.901636.05205
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021690
(v1.0)
Ubac1FR021728,NM_13383598766
32.059217.100217.13654.172318.8486
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021690
(v1.0)
Ubac1NM_13383598766
29.9482.3250619.1482
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021690
(v1.0)
Ubac1NM_13383598766
29.232217.374421.5636
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021690
(v1.0)
Ubac1FR021728,NM_13383598766
17.362123.3071
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021690
(v1.0)
Ubac1NM_13383598766
29.96542.2932123.6502
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021690
(v1.0)
Ubac1NM_13383598766
6.500573.767184.50646
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021690
(v1.0)
Ubac1FR021728,NM_13383598766
4.127095.47631
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021690
(v1.0)
Ubac1NM_13383598766
4.182142.37641
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021690
(v1.0)
Ubac1NM_13383598766
6.222222.27895
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021690
(v1.0)
5616H3003H11-3Mm.2006661110033G07Rik98766
U022410NAP090247-11110033G07Rik;TC8696393.41933.60793.41643.67723.41663.64693.8168
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021690
(v1.0)
1416963_atMm.247824Ubac1NM_133835.298766
571.45443.3388.8266.875587.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021690
(v1.0)
A_51_P504478Ubadc1NM_13383598766
11P0.7030.176P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021690
(v1.0)
Ubac198766
110130