DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021721
GeneUbe2k
SynonymsD5Ertd601e
Hip2
Desc.ubiquitin-conjugating enzyme E2K
LocusNM_016786 chr5:65928500-65990228(+)
DB links


Entrez 53323
MGI 1858216
Ensembl ENSMUSG00000029203
Vega OTTMUSG00000028413
Featureprotein-coding
GO(BP)
  •   5 Terms
      metabolic process (GO:0008152)
      protein ubiquitination (GO:0016567)
      regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032434)
      intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (GO:0070059)
      protein K48-linked ubiquitination (GO:0070936)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022357
(v2.0)
Ube2kNM_01678653323
144.51577.8867132.484134.61338.685624.209115.9148106.01842.76429.233
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021721
(v1.0)
Ube2k53323
Major ZGA0.92252
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022357
(v2.0)
Ube2k53323
744/3590.5373515/3590.4034648/3594.40732173/3593.919519/359-2.1248187/359-1.5327
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022357
(v2.0)
Ube2k53323
427/1361.1321282/1360.9309599/1365.61911860/1365.07926/136-2.265866/136-1.6202
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022357
(v2.0)
Ube2k53323
46.407512537.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022357
(v2.0)
Ube2k53323
9.34618311.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
80.951191.1386100.15126.81911.2745
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
101.018105.273123.90131.430713.0061
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
84.641852.850799.4342
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
82.618890.223578.4428
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
106.93984.6218
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
84.69152.126886.0335
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
92.723825.894829.5779
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
45.535349.0528
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021721
(v1.0)
Ube2kNM_01678653323
119.144102.771
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021721
(v1.0)
Ube2kNM_01678653323
54.353266.5614
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021721
(v1.0)
3731C0870D01-3Mm.10082Hip253323
U005629NAP001098-001Hip2;TC793517,TC793512,TC793507O54806U,F,23.9823.99373.10013.08472.19312.36142.4224
0021721
(v1.0)
9498H3082D05-3Mm.10082Hip253323
U005629NAP001098-001Hip2;TC793517,TC793516,TC793515,TC793513,TC793512,TC793507O54806U,F,24.47184.55653.87494.18933.81544.15864.0585
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021721
(v1.0)
1417186_atMm.319512Ube2kNM_016786.353323
2698.152903.752226.21078.51469.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021721
(v1.0)
A_51_P363714Hip2NM_01678653323
11P0.5790.115P
0021721
(v1.0)
A_52_P279599Hip2NM_01678653323
11P1.030.818P
0021721
(v1.0)
A_52_P485376Hip2NM_01678653323
11P0.7870.252P
0021721
(v1.0)
A_52_P50305Hip2NM_01678653323
11P1.2650.256P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021721
(v1.0)
Ube2k53323
8125112912