DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021725
GeneUbe2n
SynonymsUBC13
Desc.ubiquitin-conjugating enzyme E2N
LocusNM_080560 chr10:94977796-95008292(+)
DB links


Entrez 93765
MGI 1934835
Ensembl ENSMUSG00000074781
Featureprotein-coding
GO(BP)
  •   16 Terms
      double-strand break repair via homologous recombination (GO:0000724)
      DNA double-strand break processing (GO:0000729)
      DNA repair (GO:0006281)
      postreplication repair (GO:0006301)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      response to DNA damage stimulus (GO:0006974)
      protein ubiquitination (GO:0016567)
      histone ubiquitination (GO:0016574)
      positive regulation of histone modification (GO:0031058)
      regulation of histone ubiquitination (GO:0033182)
      positive regulation of I-kappaB kinase/NF-kappaB cascade (GO:0043123)
      positive regulation of DNA repair (GO:0045739)
      T cell receptor signaling pathway (GO:0050852)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
      positive regulation of ubiquitin-protein ligase activity (GO:0051443)
      protein K63-linked ubiquitination (GO:0070534)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022361
(v2.0)
Ube2nNM_08056093765
400.11240.715956.161455.563852.871156.547128.893245.012140.104965.3061
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021725
(v1.0)
Ube2n93765
2-Cell Transient0.84412
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022361
(v2.0)
Ube2n93765
794/3590.6309594/3590.6089906/3594.89023071/3594.418355/359-0.6393303/359-0.8408
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022361
(v2.0)
Ube2n93765
452/1461.1122314/1460.9837602/1465.53211744/1464.885817/146-1.0027105/146-1.0641
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022361
(v2.0)
Ube2n93765
44.912912436.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022361
(v2.0)
Ube2n93765
13.08719014.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021725
(v1.0)
Ube2nNM_08056093765
42.3238.607741.351636.658520.4728
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021725
(v1.0)
Ube2nFR295492,NM_08056093765
2.568962.856231.737871.721272.06639
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021725
(v1.0)
Ube2nNM_08056093765
44.2494146.32542.1219
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021725
(v1.0)
Ube2nNM_08056093765
43.191838.220133.2579
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021725
(v1.0)
Ube2nFR295492,NM_08056093765
2.900932.04398
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021725
(v1.0)
Ube2nNM_08056093765
44.2751144.32136.4762
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021725
(v1.0)
Ube2nNM_08056093765
38.285135.395227.6943
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021725
(v1.0)
Ube2nFR295492,NM_08056093765
1.702721.31479
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021725
(v1.0)
Ube2nNM_08056093765
10.912125.6436
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021725
(v1.0)
Ube2nNM_08056093765
11.765416.6425
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021725
(v1.0)
3189C0616D06-3Mm.30233Ube2n93765
U043105NAP093963-001TC919617Q9DAJ6U,F3.52743.70423.52683.77933.29563.53423.3632
0021725
(v1.0)
11795H3123C03-5Ube2n93765
U043105NAP032603-1TC919620,TC919618,TC919617Q9DAJ6U,F2.90173.10563.10143.18432.83782.90682.8455
0021725
(v1.0)
14019J0250A04-3Mm.30233Ube2n93765
U043105NAP093963-001Ube2n;TC919617Q9DAJ6U,F3.72393.69662.99843.01513.19783.04923.1001
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021725
(v1.0)
1422559_atMm.371667Ube2n93765
329.575387.775456.7213.7269.1
0021725
(v1.0)
1435384_atMm.371667Ube2n93765
0000206.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021725
(v1.0)
A_51_P392134Ube2nNM_08056093765
11P0.980.874P
0021725
(v1.0)
A_52_P146164Ube2nNM_08056093765
11P0.6610.164P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021725
(v1.0)
Ube2n93765
134135