DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021755
GeneUbqln1
SynonymsD13Ertd372e
DA41
Dsk2
Plic-1
XDRP1
Desc.ubiquilin 1
LocusNM_026842 chr13:58277517-58317014(-)
NM_152234 chr13:58277517-58317014(-)
DB links


Entrez 56085
MGI 1860276
Ensembl ENSMUSG00000005312
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022391
(v2.0)
Ubqln1NM_026842,NM_15223456085
42.0325213.561195.024123.17598.645937.352945.4593155.27580.14635.9011
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021755
(v1.0)
Ubqln156085
Maternal RNA0.99347
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022391
(v2.0)
Ubqln156085
701/4030.2852453/4030.0524326/4033.2568783/4032.282440/403-1.2541414/403-0.5588
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022391
(v2.0)
Ubqln156085
391/1930.5035233/1930.1548312/1934.2107729/1933.231913/193-1.7581144/193-1.0142
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022391
(v2.0)
Ubqln156085
49.090312539.27
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022391
(v2.0)
Ubqln156085
12.60258415
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
221.986134.81991.676768.336532.1922
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
232.10715.3717147.091
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
226.559133.466115.01
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
675.91744.346
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
232.24215.1612126.14
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
84.878465.981655.4254
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
166.489155.672
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
147.06834.0527
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021755
(v1.0)
Ubqln1NM_026842,NM_15223456085
155.831166.037
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021755
(v1.0)
6491H3026A10-3Mm.182053Ubqln156085
U034844NAP095740-001Ubqln1;TC926372,TC914403Q9QZM1U,F,23.4043.31072.67052.42712.19222.39772.3979
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021755
(v1.0)
1419385_a_atMm.182053Ubqln1NM_026842.4,NM_152234.256085
256.225502.325326.525195.575163.825
0021755
(v1.0)
1424368_s_atMm.182053Ubqln1NM_026842.4,NM_152234.256085
1972.1753633.3251243.975585.0751136.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021755
(v1.0)
A_51_P275740Ubqln1AF17734556085
11P1.4340.173P
0021755
(v1.0)
A_51_P504105Ubqln1NM_15223456085
11P0.5830.144P
0021755
(v1.0)
A_52_P322658Ubqln1NM_02684256085
11P0.7550.224P
0021755
(v1.0)
A_52_P434974Ubqln1NM_15223456085
11P0.9670.796P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021755
(v1.0)
Ubqln156085
253.525.56