DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021770
GeneUbxn1
SynonymsD19Ertd721e
T25529
Desc.UBX domain protein 1
LocusNM_146093 chr19:8946049-8950146(+)
DB links


Entrez 225896
MGI 1289301
Ensembl ENSMUSG00000071655
Featureprotein-coding
GO(BP)
  •   2 Terms
      negative regulation of protein ubiquitination (GO:0031397)
      negative regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032435)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022406
(v2.0)
Ubxn1NM_146093225896
123.4729.69411.6998214.114612.619261.59763.07139.00337586.074304.366
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021770
(v1.0)
Ubxn1225896
MGA0.99757
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022406
(v2.0)
Ubxn1225896
629/4290.0392391/429-0.2494130/4291.8494266/4290.63879/429-3.3791121/429-2.4107
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022406
(v2.0)
Ubxn1225896
331/1630.5065177/1630.0027125/1633.126253/1631.94910/163-5.327345/163-2.4173
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022406
(v2.0)
Ubxn1225896
75.159313555.67
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022406
(v2.0)
Ubxn1225896
28.61968633.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
30.87048.13687159.485425.79844.7302
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
80.151271.3077284.383650.83767.3642
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
32.277845.15418.8775
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
31.50648.055176.67842
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
66.877341.1643
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
32.296644.53577.32467
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
147.659411.125404.75
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
778.988697.79
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021770
(v1.0)
Ubxn1NM_146093225896
18.0046177.871
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021770
(v1.0)
Ubxn1NM_146093225896
4.789981.36583
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021770
(v1.0)
6008H3014G04-3Mm.27839MGC6696225896
U019130NAP095676-001MGC6696;TC909407,TC909404,TC909403Q922Y13.75373.86464.49115.22524.7644.96094.5951
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021770
(v1.0)
1436342_a_atMm.27839Ubxn1NM_146093.1225896
101.9546.2677.11987.975815.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021770
(v1.0)
A_52_P568805D19Ertd721eNM_146093225896
11P0.6970.172P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021770
(v1.0)
Ubxn1225896
222232