DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021775
GeneUbxn4
SynonymsUbxd2
Desc.UBX domain protein 4
LocusNM_026390 chr1:130140758-130175954(+)
DB links


Entrez 67812
MGI 1915062
Ensembl ENSMUSG00000026353
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022411
(v2.0)
Ubxn4NM_02639067812
18.099846.142551.677147.968626.75312.566516.414552.114325.777313.5315
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021775
(v1.0)
Ubxn467812
Maternal RNA0.9345
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022411
(v2.0)
Ubxn467812
577/3460.2244453/3460.2718557/3464.24081363/3463.299820/346-2.001895/346-2.4455
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022411
(v2.0)
Ubxn467812
325/1640.4715217/1640.2862538/1645.21471280/1644.27488/164-2.16642/164-2.5222
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022411
(v2.0)
Ubxn467812
29.443911026.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022411
(v2.0)
Ubxn467812
10.51188911.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
47.964435.814535.698418.532211.5965
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
60.744940.975142.167723.559413.9268
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
50.15126.6192639.0744
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
48.952535.454838.6758
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
41.607646.8819
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
50.18036.528642.4183
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
33.051217.893617.8473
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
345.167319.593
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021775
(v1.0)
Ubxn4NM_02639067812
41.643444.4221
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021775
(v1.0)
Ubxn4NM_02639067812
26.776739.6153
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021775
(v1.0)
7805H3054B10-3Mm.223971300013G12Rik67812
U042203NAP093313-0011300013G12Rik;TC909202,TC909200Q9CT42U,F,23.48783.61413.79084.0833.20133.62673.3903
0021775
(v1.0)
19793L0304F06-3Mm.223971300013G12Rik67812
U042203NAP123577-11300013G12Rik;TC909200Q9CT42U,F,23.36433.42342.82742.69572.41152.66562.7732
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021775
(v1.0)
1426484_atMm.293321Ubxn4NM_026390.267812
51.7129.47555.77500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021775
(v1.0)
A_52_P170610Ubxd2NM_02639067812
11P0.3270.0583P
0021775
(v1.0)
A_52_P298145Ubxd2NM_02639067812
11P0.310.0556P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021775
(v1.0)
Ubxn467812
240240