DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021797
GeneUfm1
Synonyms
Desc.ubiquitin-fold modifier 1
LocusNM_026435 chr3:53657298-53667729(-)
DB links


Entrez 67890
MGI 1915140
Ensembl ENSMUSG00000027746
Vega OTTMUSG00000028195
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022435
(v2.0)
Ufm1NM_02643567890
13.70647.0053112.688518.778926.97538.788379.6265510.416818.888611.3682
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021797
(v1.0)
Ufm167890
MGA0.95502
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022435
(v2.0)
Ufm167890
657/477-0.0508423/477-0.2889190/4772.2444456/4771.261972/477-0.6628478/477-0.5948
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022435
(v2.0)
Ufm167890
281/214-0.1193186/214-0.3169181/2143.2878431/2142.327823/214-1.126588/214-1.8635
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022435
(v2.0)
Ufm167890
75.458515449
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022435
(v2.0)
Ufm167890
26.12910325.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
7.280138.7537913.983618.75056.7799
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
52.574649.066297.3435127.69134.9842
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
7.612055.012599.55058
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
7.430118.66597.71452
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
4.3628120.004
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
7.616474.943938.46103
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
12.946618.104413.0432
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
316.398140.578
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021797
(v1.0)
Ufm1NM_02643567890
9.2058110.0354
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021797
(v1.0)
Ufm1NM_02643567890
5.678817.8754
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021797
(v1.0)
2981C0458H03-3Mm.289171810045K17Rik67890
U024050NAP093852-0011810045K17Rik;TC847873Q9CPX2U,F,23.97964.02693.42453.53473.40813.45863.4544
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021797
(v1.0)
1449263_atMm.23067Ufm1NM_026435.567890
124198.35190.125137.8110.75
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021797
(v1.0)
Ufm167890
110120