DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021827
GeneUhrf1
SynonymsICBP90
Np95
Desc.ubiquitin-like, containing PHD and RING finger domains, 1
LocusNM_001111079 chr17:56442760-56462909(+)
NM_010931 chr17:56442760-56462909(+)
NM_001111078 chr17:56443736-56462909(+)
NM_001111080 chr17:56443736-56462909(+)
DB links


Entrez 18140
MGI 1338889
Ensembl ENSMUSG00000001228
Vega OTTMUSG00000021035
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022465
(v2.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
4.80263288.886277.81729.643714.914866.600840.7652263.46923.601366.7152
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021827
(v1.0)
Uhrf118140
Maternal RNA0.99756
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022465
(v2.0)
Uhrf118140
783/4870.1719429/487-0.2985177/4872.1135666/4871.777656/487-1.0494416/487-0.8244
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022465
(v2.0)
Uhrf118140
390/1990.4559153/199-0.4925131/1992.9234434/1992.441416/199-1.5212127/199-1.2374
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022465
(v2.0)
Uhrf118140
84.202417149.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022465
(v2.0)
Uhrf118140
23.622610622.29
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
300.261192.89622.066610.333629.0296
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
350.047133.92233.16886.0029762.9097
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
313.951.75637210.454
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
306.446190.959195.568
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
601.882378.893
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
314.1321.73231214.493
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
20.43029.9775116.5606
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
5.4861244.5374
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
152.2743.84494
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021827
(v1.0)
Uhrf1NM_001111078,NM_001111079,NM_001111080,NM_01093118140
29.581768.1107
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021827
(v1.0)
20402L0544D02-3Mm.42196Np9518140
4.52474.4233.76563.63184.15083.88914.1247
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021827
(v1.0)
1415810_atMm.42196Uhrf1NM_010931.3,NM_001111079.1,NM_001111078.1,NM_001111080.118140
1241.91835.425648.47571.55438.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021827
(v1.0)
A_51_P491742Uhrf1NM_01093118140
11P0.8450.341P
0021827
(v1.0)
A_52_P314705Uhrf1NM_01093118140
11P0.630.135P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021827
(v1.0)
Uhrf118140
6891614841764265