DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021839
GeneUmps
Synonyms
Desc.uridine monophosphate synthetase
LocusNM_009471 chr16:33955098-33967089(-)
DB links


Entrez 22247
MGI 1298388
Ensembl ENSMUSG00000022814
Vega OTTMUSG00000031003
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022477
(v2.0)
UmpsNM_00947122247
7.439713.34497.8039557.110364.894935.996125.94997.8888873.239940.5927
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021839
(v1.0)
Umps22247
Major ZGA0.99114
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022477
(v2.0)
Umps22247
617/4210.0385462/4210.0178102/4211.5289260/4210.6329131/4210.3703633/421-0.0109
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022477
(v2.0)
Umps22247
279/1940.0113187/194-0.168399/1942.5575245/1941.655346/194-0.0182206/194-0.5096
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022477
(v2.0)
Umps22247
70.172211859.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022477
(v2.0)
Umps22247
19.52866530.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021839
(v1.0)
UmpsNM_00947122247
13.87155.3922942.551945.075318.6152
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021839
(v1.0)
UmpsNM_00947122247
25.30468.5456861.939776.133633.2903
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
14.50392.720775.8831
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
14.15735.338145.84834
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
13.122312.5772
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
14.51242.683516.41426
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
39.396443.52250.7625
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
94.749126.233
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021839
(v1.0)
UmpsNM_00947122247
3.9089810.5738
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021839
(v1.0)
UmpsNM_00947122247
0.4859150.698432
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021839
(v1.0)
284C0033B05-3Mm.13145Umps22247
U041191NAP094945-001Umps;TC842443,TC842442P13439U,F,23.34743.42673.74883.76623.56293.65753.6168
0021839
(v1.0)
5659H3004G09-3Mm.13145Umps22247
U041191NAP094945-001Umps;TC842443,TC842442P13439U,F,22.24832.43412.50132.85282.28552.49592.4093
0021839
(v1.0)
20525L0701C10-3Mm.227819U041191NAP036882-1Umps;TC842442P13439U,F,22.25272.29792.02582.15272.48172.3912.3246
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021839
(v1.0)
1434859_atMm.13145UmpsNM_009471.222247
104.55111.15115.65222.5214.85
0021839
(v1.0)
1455832_a_atMm.13145UmpsNM_009471.222247
000255.3208.275
0021839
(v1.0)
1451445_atMm.13145UmpsNM_009471.222247
000020.1
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021839
(v1.0)
Umps22247
130140