DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021864
GeneUpf1
SynonymsPNORF-1
Rent1
DescriptionUPF1 regulator of nonsense transcripts homolog (yeast)
LocusNM_030680 UCSC: chr8:72855421-72877172(-) OLP: chr8:72855421-72877172(-)
NM_001122829 UCSC: chr8:72855421-72877172(-) OLP: chr8:72855421-72877172(-)
DB links


Entrez 19704
MGI 107995
Ensembl ENSMUSG00000058301
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2022502 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
68.855321.229326.493515.52274.84035
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
71.99455.7622423.1616
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
70.273821.016134.0603
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
72.03645.6833237.3562
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
24.528814.987812.6449
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
35.73111.1363
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021864
(v1.0)		Upf1NM_001122829,NM_03068019704
24.546346.4926
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0021864
(v1.0)		A_51_P296057Rent1NM_03068019704
11P1.0510.706P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021864
(v1.0)		Upf119704
1119511255