DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021902
GeneUsp1
Synonyms
Desc.ubiquitin specific peptidase 1
LocusNM_146144 chr4:98590501-98602224(+)
DB links


Entrez 230484
MGI 2385198
Ensembl ENSMUSG00000028560
Vega OTTMUSG00000008702
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022545
(v2.0)
Usp1NM_146144230484
11.976777.8027167.766292.217357.62143.032727.4089111.971309.02635.1289
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021902
(v1.0)
Usp1230484
Major ZGA0.96057
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022545
(v2.0)
Usp1230484
703/3900.3365469/3900.1495207/3902.65549/3901.81857/390-0.7069414/390-0.5116
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022545
(v2.0)
Usp1230484
431/1650.8685249/1650.475204/1653.8118497/1652.90317/165-2.344586/165-1.5229
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022545
(v2.0)
Usp1230484
38.773217222.54
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022545
(v2.0)
Usp1230484
5.72931364.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021902
(v1.0)
Usp1NM_146144230484
80.8215115.849217.505247.5119.5151
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021902
(v1.0)
Usp1NM_146144230484
97.1188140.46226.087271.01719.7031
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
84.50624.37999126.394
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
82.4865114.68682.7478
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
49.015841.7
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
84.55544.3290.755
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
201.375238.981213.528
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
228.859210.599
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021902
(v1.0)
Usp1NM_146144230484
87.6674172.288
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021902
(v1.0)
Usp1NM_146144230484
27.944335.8696
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021902
(v1.0)
7099H3042A11-3Mm.27496MGC25559230484
U004526NAP096867-001MGC25559;TC919488,TC919487U,F,23.33053.34583.12133.48152.713.0132.7826
0021902
(v1.0)
10044H3090B04-3MGC25559230484
U004526NAP096867-001Usp1TC919488,TC919487U,F,24.15064.05263.82484.50783.79233.77153.625
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021902
(v1.0)
1451080_atMm.371692Usp1NM_146144.3230484
1044.7751527.7252960.2753041.025941.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021902
(v1.0)
A_51_P381657Usp1NM_146144230484
11P0.7280.194P
Proteome N/A