DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021924
GeneUsp30
SynonymsD5Ertd483e
Desc.ubiquitin specific peptidase 30
LocusNM_001033202 chr5:114550342-114572933(+)
DB links


Entrez 100756
MGI 2140991
Ensembl ENSMUSG00000029592
Vega OTTMUSG00000016815
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022571
(v2.0)
Usp30NM_001033202100756
11.2174131.15892.84266.60549.686285.7889110.1525118.24112.22865.63617
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021924
(v1.0)
Usp30100756
Maternal RNA0.98637
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022571
(v2.0)
Usp30100756
721/4900.0443429/490-0.307373/4900.8386248/4900.3473107/490-0.1362801/4900.1095
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022571
(v2.0)
Usp30100756
376/2100.3261222/210-0.035955/2101.6131170/2101.017752/2100.0431283/210-0.1681
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022571
(v2.0)
Usp30100756
80.115613559.34
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022571
(v2.0)
Usp30100756
29.35088235.79
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
136.38664.41954.921296.721457.18179
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
5755.442354.65135.437195.636301.416
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
142.6044.102370.2831
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
139.19663.772787.6386
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
2381.152562.78
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
142.6874.0461296.1191
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
4.556356.489838.55546
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
132.3178.058
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021924
(v1.0)
Usp30NM_001033202100756
37.32990.674278
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021924
(v1.0)
Usp30NM_001033202100756
46.410533.5711
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021924
(v1.0)
7959H3057B04-3Mm.7817AI851327100756
U006023NAP007014-001AI851327TC920995U,F3.71953.60443.62193.38993.90283.53223.8094
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021924
(v1.0)
1436009_atMm.240421Usp30NM_001033202.3100756
1815.6751290.225000
0021924
(v1.0)
1455598_atMm.240421Usp30NM_001033202.3100756
1322.2949.85000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021924
(v1.0)
A_51_P161413Usp30XM_149655100756
11P0.820.297P
0021924
(v1.0)
A_52_P179272Usp30XM_149655100756
11P1.1340.438P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0021924
(v1.0)
Usp30100756
2912211