DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021928
GeneUsp34
SynonymsMurr2
Desc.ubiquitin specific peptidase 34
LocusNM_001190401 chr11:23206895-23390560(+)
DB links


Entrez 17847
MGI 109473
Ensembl ENSMUSG00000056342
Vega OTTMUSG00000005281
Featureprotein-coding
GO(BP)
  •   5 Terms
      proteolysis (GO:0006508)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      Wnt receptor signaling pathway (GO:0016055)
      protein K48-linked deubiquitination (GO:0071108)
      positive regulation of canonical Wnt receptor signaling pathway (GO:0090263)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022575
(v2.0)
Usp34NM_00119040117847
10.109131.354941.924353.096835.07929.0669424.299330.644436.4858.64485
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021928
(v1.0)
Usp3417847
Major ZGA0.97877
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022575
(v2.0)
Usp3417847
625/3030.5303438/3030.4142148/3032.5204282/3031.220813/303-2.3977117/303-1.9584
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022575
(v2.0)
Usp3417847
350/1021.2578201/1020.8561146/1023.9661273/1022.72173/102-2.672454/102-1.491
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022575
(v2.0)
Usp3417847
29.341512723.1
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022575
(v2.0)
Usp3417847
5.97771035.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
32.794929.001239.777924.434116.9311
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
2735.33313.575500.483503.911886.16
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
34.29013.7211731.641
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
33.470528.7122.7777
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
2352.581589.47
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
34.313.6702124.9818
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
36.828223.592125.3821
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
769.006802.316
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021928
(v1.0)
Usp34NM_00119040117847
26.717251.7907
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021928
(v1.0)
Usp34NM_00119040117847
6.122438.05388
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021928
(v1.0)
1434392_atMm.119155Usp34NM_001190401.117847
742.5713.2659.725577.375460.725
0021928
(v1.0)
1444437_atMm.119155Usp34NM_001190401.117847
88.625102.875104.775159.425141.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021928
(v1.0)
A_51_P453488Usp34AK12916517847
11P0.6680.157P
0021928
(v1.0)
A_52_P172453Usp34AK03318217847
11P0.3870.141P
0021928
(v1.0)
A_52_P58059Usp34XM_48399617847
11P0.840.401P
Proteome N/A