DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021932
GeneUsp38
Synonyms
Desc.ubiquitin specific peptidase 38
LocusNM_027554 chr8:83504632-83538805(-)
DB links


Entrez 74841
MGI 1922091
Ensembl ENSMUSG00000038250
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022579
(v2.0)
Usp38NM_02755474841
5.6740490.3426154.365187.41883.53727.8189610.4914123.44676.94965.91212
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021932
(v1.0)
Usp3874841
Major ZGA0.98725
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022579
(v2.0)
Usp3874841
816/4340.3973583/4340.3091235/4345.07123342/4344.268370/434-0.5678443/434-0.5681
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022579
(v2.0)
Usp3874841
468/2210.5675305/2210.34721084/2215.81952462/2214.793212/221-2.0566121/221-1.457
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022579
(v2.0)
Usp3874841
53.97614437.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022579
(v2.0)
Usp3874841
16.101310115.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021932
(v1.0)
Usp38NM_02755474841
93.8992106.976139.65157.92677.44831
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021932
(v1.0)
Usp38NM_02755474841
129.575118.765212.143119.97917.5632
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
98.18022.07505116.713
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
95.8336105.90291.4758
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
118.222104.191
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
98.23732.04663100.328
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
129.29555.930653.0946
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
65.879862.0113
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021932
(v1.0)
Usp38NM_02755474841
16.85862.2928
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021932
(v1.0)
Usp38NM_02755474841
23.030213.2448
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021932
(v1.0)
6416H3024G11-3Mm.134374833420O05Rik74841
U030007NAP000232-0024833420O05Rik;TC859367U,F,23.60053.53273.30623.31213.07692.96643.0619
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021932
(v1.0)
1428592_s_atMm.246018Usp38NM_027554.274841
106.525191.175285.875137.0750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021932
(v1.0)
A_52_P22180Usp38NM_02755474841
11P10.320.0274P
0021932
(v1.0)
A_52_P235479Usp38NM_02755474841
11P0.6630.152P
0021932
(v1.0)
A_52_P266106Usp38NM_02755474841
11P1.6830.179P
Proteome N/A