DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021954
GeneUspl1
Synonyms
Desc.ubiquitin specific peptidase like 1
LocusNM_001115149 chr5:149996136-150027010(+)
NM_001115150 chr5:149996136-150027010(+)
NM_001115153 chr5:149996136-150027010(+)
NM_001115151 chr5:149996136-150027010(+)
NM_001013378 chr5:149996136-150027010(+)
DB links


Entrez 231915
MGI 2442342
Ensembl ENSMUSG00000041264
Vega OTTMUSG00000028825
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022601
(v2.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153,NM_001286824,NM_001286825231915
12.99283.9026310.503585.043129.185228.940227.7568.0921728.377530.2484
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021954
(v1.0)
Uspl1231915
2-Cell Transient0.99994
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022601
(v2.0)
Uspl1231915
621/3390.3596457/3390.3139286/3393.3101705/3392.37919/339-2.043136/339-1.9053
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022601
(v2.0)
Uspl1231915
329/1560.5607197/1560.2191270/1564.2897660/1563.391310/156-1.806246/156-2.3237
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022601
(v2.0)
Uspl1231915
69.854418138.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022601
(v2.0)
Uspl1231915
10.23111178.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
3.991217.2495462.735820.152919.5557
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021954
(v1.0)
Uspl1FR141858,FR352877,NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
6.1277212.018294.085230.99632.7657
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
4.173174.751617.9094
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
4.073437.176755.99605
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021954
(v1.0)
Uspl1FR141858,FR352877,NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
23.86538.6992
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
4.17564.686536.57627
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
58.083519.458419.5247
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021954
(v1.0)
Uspl1FR141858,FR352877,NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
29.760729.8926
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
1.2303342.0235
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021954
(v1.0)
Uspl1NM_001013378,NM_001115149,NM_001115150,NM_001115151,NM_001115153231915
0.2164770.37643
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021954
(v1.0)
18554L0214D09-3Mm.29402D030048C09231915
U006473NAP005324-001TC820101,TC820099U,F,22.36152.38322.80362.88782.34832.50592.3468
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021954
(v1.0)
1433927_atMm.29402Uspl1NM_001115153.1,NM_001115149.1,NM_001115150.1,NM_001013378.2,NM_001115151.1231915
002970.7723.4966.25
Agilent44K N/A
Proteome N/A