DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0021964
GeneUtp3
SynonymsCrlz1
Desc.UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
LocusNM_023054 chr5:88983508-88985108(+)
DB links


Entrez 65961
MGI 1919230
Ensembl ENSMUSG00000070697
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022611
(v2.0)
Utp3NM_02305465961
18.258614.29559.1040158.567559.882479.117532.648911.164858.1903103.272
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0021964
(v1.0)
Utp365961
Major ZGA0.99814
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022611
(v2.0)
Utp365961
490/2650.3727312/2650.1189191/2653.0716471/2652.150411/265-2.429647/265-3.0543
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022611
(v2.0)
Utp365961
316/1410.6477170/1410.1526189/1413.9123462/1413.02118/141-1.953826/141-2.9669
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022611
(v2.0)
Utp365961
28.938113421.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022611
(v2.0)
Utp365961
15.456611813.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021964
(v1.0)
Utp3NM_02305465961
14.85046.3063743.562341.435522.8624
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0021964
(v1.0)
Utp3NM_02305465961
17.73096.8091348.669347.427426.2234
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
15.52756.677356.88038
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
15.15646.243048.29165
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
6.914289.2959
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
15.53656.585899.094
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
40.331940.007640.2154
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
46.91647.0759
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0021964
(v1.0)
Utp3NM_02305465961
40.50460.883
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0021964
(v1.0)
Utp3NM_02305465961
15.79566.18016
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021964
(v1.0)
1180C0183F08-3Mm.88546Crlz165961
U041325NAP098640-001TC794030,TC794029U,F,23.27383.4213.79834.22713.32963.48163.3048
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0021964
(v1.0)
1417583_a_atMm.88546Utp3NM_023054.165961
334.025171.65499.275831.175555.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0021964
(v1.0)
A_51_P325485Crlz1NM_02305465961
11P0.7050.177P
0021964
(v1.0)
A_52_P429289Crlz1NM_02305465961
11P0.780.246P
Proteome N/A