DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022012
GeneVdac1
SynonymsVdac5
Desc.voltage-dependent anion channel 1
LocusNM_011694 chr11:52174617-52202898(+)
DB links


Entrez 22333
MGI 106919
Ensembl ENSMUSG00000020402
Vega OTTMUSG00000005626
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022659
(v2.0)
Vdac1NM_01169422333
105.45423.751388.612999.853144.984314.13396.502775.7346112.117370.065
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022012
(v1.0)
Vdac122333
MGA0.99846
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022659
(v2.0)
Vdac122333
800/4490.3198507/4490.0589211/4492.4799627/4491.8073296/4491.44821435/4491.0752
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022659
(v2.0)
Vdac122333
431/2180.4687304/2180.3621199/2183.3986586/2182.7438237/2182.15711068/2181.6886
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022659
(v2.0)
Vdac122333
60.636917035.67
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022659
(v2.0)
Vdac122333
13.281211911.16
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
24.684961.283974.3424100.32168.2378
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
123.964420.21394.011478.009271.284
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
25.810438.565566.862
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
25.193560.668556.0595
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
426.518366.221
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
25.825438.037361.4842
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
68.829596.863877.4669
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
300.6497.1464
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022012
(v1.0)
Vdac1NM_01169422333
40.389529.7939
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022012
(v1.0)
Vdac1NM_01169422333
17.275914.0273
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022012
(v1.0)
18274L0075H01-3Mm.3555Vdac122333
U012584NAP122455-001Vdac1;TC852259Q60932U,F,22.85892.97482.84382.94712.86863.01943.1039
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022012
(v1.0)
1415998_atMm.3555Vdac1NM_011694.422333
94.275181.25358.25417.3759.9
0022012
(v1.0)
1436992_x_atMm.3555Vdac1NM_011694.422333
320.9751014.5751572.952573.0753301.125
0022012
(v1.0)
1437192_x_atMm.3555Vdac1NM_011694.422333
158.725239.625440.625750.4251251.825
0022012
(v1.0)
1437947_x_atMm.3555Vdac1NM_011694.422333
4078.175180.8225.825275.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022012
(v1.0)
A_51_P130459Vdac1NM_01169422333
11P0.1050.0282P
0022012
(v1.0)
A_52_P909310Vdac1NM_01169422333
11P1.20.319P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022012
(v1.0)
Vdac122333
20.67121.332