DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022014
GeneVdac3
Synonyms
Desc.voltage-dependent anion channel 3
LocusNM_011696 chr8:23687547-23704285(-)
NM_001198998 chr8:23687547-23704285(-)
DB links


Entrez 22335
MGI 106922
Ensembl ENSMUSG00000008892
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022661
(v2.0)
Vdac3NM_001198998,NM_01169622335
49.893180.624179.23336.58781.5246136.391152.863204.15980.6429136.72
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022014
(v1.0)
Vdac322335
Maternal RNA0.97303
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022661
(v2.0)
Vdac322335
704/4220.225507/4220.1482161/4222.1789328/4220.963674/422-0.4487626/422-0.0304
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2022661
(v2.0)
Vdac322335
338/1780.4103236/1780.2892153/1783.297308/1782.106826/178-0.6964162/178-0.7299
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022661
(v2.0)
Vdac322335
72.199215646.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2022661
(v2.0)
Vdac322335
21.963310021.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
187.698123.67527.253656.804108.948
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
11.84966.264911.621191.823063.58269
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
196.25618.2465134.932
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
191.565122.433151.325
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
6.3613312.4343
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
196.3717.9965165.968
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
25.232654.846555.6958
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
1.803282.76792
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
48.523924.1837
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022014
(v1.0)
Vdac3NM_001198998,NM_01169622335
30.4410.2489
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022014
(v1.0)
18666L0221B07-3Mm.133962Vdac322335
U029637NAP095316-001TC897573,TC897571Q60931U,F,23.49993.67193.53753.54743.76323.64873.7771
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022014
(v1.0)
1416175_a_atMm.227704Vdac3NM_001198998.1,NM_011696.222335
2957.152108.2251863.75988.1252220.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022014
(v1.0)
A_51_P137971Vdac3NM_01169622335
11P0.5430.103P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022014
(v1.0)
Vdac322335
11135212611