DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022396
GeneVps29
SynonymsPEP11
Descriptionvacuolar protein sorting 29 (S. pombe)
LocusNM_019780 UCSC: chr5:122804422-122813296(+) OLP: chr5:122804422-122813296(+)
DB links


Entrez 56433
MGI 1928344
Ensembl ENSMUSG00000029462
Vega OTTMUSG00000026702
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2023046 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022396
(v1.0)
Vps29NM_01978056433
55.157431.86648.392125.4502253.3996
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022396
(v1.0)
Vps29NM_01978056433
57.672220.636234.7669
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022396
(v1.0)
Vps29NM_01978056433
56.293731.546435.9051
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022396
(v1.0)
Vps29NM_01978056433
57.705720.353639.3795
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022396
(v1.0)
Vps29NM_01978056433
7.769795.262417.64476
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022396
(v1.0)
Vps29NM_01978056433
15.8099.93042
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022396
(v1.0)
Vps29NM_01978056433
23.850619.0188
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022396
(v1.0)
11809H3123D08-3Mm.28356Vps2956433
U006136NAP007243-001Vps29;TC909455,TC909454,TC909453Q9QZ88U,F3.07763.36492.97542.90582.90243.18293.3104
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022396
(v1.0)
1417659_atMm.216528Vps29NM_019780.156433
534.075375.45252.42598.125523.225
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0022396
(v1.0)
A_51_P264554Vps29NM_01978056433
11P0.6560.148P
0022396
(v1.0)
A_52_P456071Vps29NM_01978056433
11P0.4970.0905P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022396
(v1.0)
Vps2956433
120130