DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022582
GeneWibg
SynonymsPym
PYM Protein
Desc.within bgcn homolog (Drosophila)
LocusNM_001253705 chr10:128184935-128203624(+)
NM_030100 chr10:128184935-128203624(+)
NM_001170869 chr10:128185511-128203624(+)
NM_001253704 chr10:128185511-128203624(+)
DB links


Entrez 78428
MGI 1925678
Ensembl ENSMUSG00000064030
Featureprotein-coding
GO(BP)
  •   3 Terms
      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)
      regulation of translation (GO:0006417)
      positive regulation of translation (GO:0045727)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023230
(v2.0)
WibgNM_001170869,NM_001253704,NM_001253705,NM_03010078428
13.16355.789544.7182368.3244161.84376.057616.19745.41192120.51890.4811
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022582
(v1.0)
Wibg78428
MGA0.99813
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023230
(v2.0)
Wibg78428
722/4330.2243411/433-0.191378/4333.3691025/4332.567564/433-0.6919413/433-0.6656
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023230
(v2.0)
Wibg78428
290/1800.1743165/180-0.2403176/1803.4827398/1802.45963/180-3.467141/180-2.6893
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023230
(v2.0)
Wibg78428
55.954417731.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023230
(v2.0)
Wibg78428
18.83758023.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
6.304813.441452.768117.09912.2884
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_030100,NR_03320878428
5.125142.8815143.958296.215411.2132
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
6.592255.024213.75464
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
6.434693.406844.23209
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_030100,NR_03320878428
2.9283.71651
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
6.596094.95544.64162
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
48.8549113.06487.5622
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_030100,NR_03320878428
95.178175.5324
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
3.733831.12804
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022582
(v1.0)
WibgNM_001170869,NM_03010078428
1.6442.60536
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022582
(v1.0)
6151H3018H07-5A030010B05Rik78428
U012196NAP097820-001TC801334,TC801333,TC801332Q9D2242.80892.84743.26053.07973.12543.21693.0345
0022582
(v1.0)
19942L0510A12-3Mm.27358A030010B05Rik78428
U012196NAP097820-001A030010B05Rik;TC801333,TC801332Q9D2242.84072.95662.82592.85842.87852.83622.7911
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022582
(v1.0)
A_52_P298071WibgNM_03010078428
11P2.2940.0911P
Proteome N/A