DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022678
GeneXrcc5
SynonymsKu80
Ku86
Desc.X-ray repair complementing defective repair in Chinese hamster cells 5
LocusNM_009533 chr1:72353995-72441527(+)
DB links


Entrez 22596
MGI 104517
Ensembl ENSMUSG00000026187
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023329
(v2.0)
Xrcc5NM_00953322596
6.1451638.679921.65274.548015.4477327.141618.700217.74786.3544826.5959
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022678
(v1.0)
Xrcc522596
Maternal RNA0.96153
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023329
(v2.0)
Xrcc522596
530/3480.0938390/3480.048178/3481.4125158/3480.190889/3480.0895507/348-0.0563
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023329
(v2.0)
Xrcc522596
221/1330.2183151/1330.066473/1332.6293131/1331.293422/133-0.5184153/133-0.3938
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023329
(v2.0)
Xrcc522596
52.04019952.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023329
(v2.0)
Xrcc522596
22.4846534.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
40.187314.99163.386413.7732113.1081
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
180.569.439615.644512.480144.1484
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
42.01952.2473516.3561
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
41.015214.84113.16
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
79.6781101.702
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
42.04392.2165714.4335
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
3.135293.643194.40685
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
10.769844.9645
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022678
(v1.0)
Xrcc5NM_00953322596
29.33112.01478
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022678
(v1.0)
Xrcc5NM_00953322596
0.667281.37719
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0022678
(v1.0)
1451968_atMm.246952Xrcc5NM_009533.222596
288.200071.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022678
(v1.0)
A_51_P201661Xrcc5NM_00953322596
11P1.1020.604P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022678
(v1.0)
Xrcc522596
450750