DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022694
GeneYbx2
SynonymsMSY2
Desc.Y box protein 2
LocusNM_016875 chr11:69749401-69755101(+)
DB links


Entrez 53422
MGI 1096372
Ensembl ENSMUSG00000018554
Vega OTTMUSG00000006029
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023346
(v2.0)
Ybx2NM_01687553422
413.338341.409475.25343.452913.892319.09330.232034760.98120.785617.4514
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0022694
(v1.0)
Ybx253422
Maternal RNA0.96573
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023346
(v2.0)
Ybx253422
829/4920.2394457/492-0.2222147/4921.8329478/4921.2853195/4920.71781431/4920.9395
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2023346
(v2.0)
Ybx253422
423/1810.7088255/1810.3765127/1813.0076423/1812.5394101/1811.1976641/1811.2204
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023346
(v2.0)
Ybx253422
89.395218448.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2023346
(v2.0)
Ybx253422
18.940910118.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
355.058329.41432.36379.624160.150951
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
1051.75950.907210.19490.28750.218637
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
371.246151.162359.398
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
362.373326.106564.884
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
2012.333002.15
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
371.462149.092619.546
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
29.96389.2925114.5747
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
175.514182.34
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022694
(v1.0)
Ybx2NM_01687553422
51.67173.3141
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022694
(v1.0)
Ybx2NM_01687553422
12.45715.1958
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0022694
(v1.0)
A_51_P455488Ybx2NM_01687553422
11P1.4130.179P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0022694
(v1.0)
Ybx253422
39352650527066